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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1008860 |
| Transcript ID | Lj1g3v1008860.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: oligopeptide transporter 6-like [Glycine max] gi|356518649|ref|XP_003527991.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 647 | 647 | 0 | – | |
| PANTHER | 1 | 647 | 647 | 0 | – | |
| Phobius | 1 | 30 | 30 | – | – | |
| TIGRFAM | 2 | 612 | 611 | 1.70E-181 | ||
| TIGRFAM | 3 | 613 | 611 | 6.20E-169 | ||
| Pfam | 8 | 610 | 603 | 4.10E-158 | ||
| TMHMM | 31 | 53 | 23 | – | – | |
| Phobius | 31 | 57 | 27 | – | – | |
| Phobius | 58 | 62 | 5 | – | – | |
| Phobius | 63 | 84 | 22 | – | – | |
| TMHMM | 63 | 84 | 22 | – | – | |
| Phobius | 85 | 124 | 40 | – | – | |
| TMHMM | 125 | 144 | 20 | – | – | |
| Phobius | 125 | 143 | 19 | – | – | |
| Phobius | 144 | 196 | 53 | – | – | |
| TMHMM | 169 | 191 | 23 | – | – | |
| Phobius | 197 | 219 | 23 | – | – | |
| TMHMM | 198 | 220 | 23 | – | – | |
| Phobius | 220 | 230 | 11 | – | – | |
| Phobius | 231 | 250 | 20 | – | – | |
| Phobius | 251 | 269 | 19 | – | – | |
| Phobius | 270 | 294 | 25 | – | – | |
| TMHMM | 272 | 294 | 23 | – | – | |
| Phobius | 295 | 328 | 34 | – | – | |
| TMHMM | 329 | 348 | 20 | – | – | |
| Phobius | 329 | 350 | 22 | – | – | |
| Phobius | 351 | 355 | 5 | – | – | |
| Phobius | 356 | 377 | 22 | – | – | |
| TMHMM | 358 | 380 | 23 | – | – | |
| Phobius | 378 | 440 | 63 | – | – | |
| TMHMM | 393 | 415 | 23 | – | – | |
| TMHMM | 440 | 462 | 23 | – | – | |
| Phobius | 441 | 463 | 23 | – | – | |
| Phobius | 464 | 510 | 47 | – | – | |
| Phobius | 511 | 531 | 21 | – | – | |
| TMHMM | 514 | 536 | 23 | – | – | |
| Phobius | 532 | 539 | 8 | – | – | |
| Phobius | 540 | 556 | 17 | – | – | |
| TMHMM | 556 | 578 | 23 | – | – | |
| Phobius | 557 | 561 | 5 | – | – | |
| Phobius | 562 | 579 | 18 | – | – | |
| Phobius | 580 | 590 | 11 | – | – | |
| Phobius | 591 | 612 | 22 | – | – | |
| TMHMM | 599 | 621 | 23 | – | – | |
| Phobius | 613 | 647 | 35 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v1008860.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1008860.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.