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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1008860 |
| Transcript ID | Lj1g3v1008860.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: oligopeptide transporter 6-like [Cicer arietinum] gi|502136453|ref|XP_004502694.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| TIGRFAM | 1 | 519 | 519 | 2.90E-150 | ||
| PANTHER | 1 | 554 | 554 | 0 | – | |
| Phobius | 1 | 31 | 31 | – | – | |
| PANTHER | 1 | 554 | 554 | 0 | – | |
| TIGRFAM | 1 | 520 | 520 | 4.40E-143 | ||
| Pfam | 1 | 517 | 517 | 6.50E-131 | ||
| TMHMM | 32 | 51 | 20 | – | – | |
| Phobius | 32 | 50 | 19 | – | – | |
| Phobius | 51 | 103 | 53 | – | – | |
| TMHMM | 76 | 98 | 23 | – | – | |
| Phobius | 104 | 126 | 23 | – | – | |
| TMHMM | 105 | 127 | 23 | – | – | |
| Phobius | 127 | 137 | 11 | – | – | |
| Phobius | 138 | 157 | 20 | – | – | |
| Phobius | 158 | 176 | 19 | – | – | |
| Phobius | 177 | 201 | 25 | – | – | |
| TMHMM | 179 | 201 | 23 | – | – | |
| Phobius | 202 | 235 | 34 | – | – | |
| TMHMM | 236 | 255 | 20 | – | – | |
| Phobius | 236 | 257 | 22 | – | – | |
| Phobius | 258 | 262 | 5 | – | – | |
| Phobius | 263 | 284 | 22 | – | – | |
| TMHMM | 265 | 287 | 23 | – | – | |
| Phobius | 285 | 347 | 63 | – | – | |
| TMHMM | 300 | 322 | 23 | – | – | |
| TMHMM | 347 | 369 | 23 | – | – | |
| Phobius | 348 | 370 | 23 | – | – | |
| Phobius | 371 | 417 | 47 | – | – | |
| Phobius | 418 | 438 | 21 | – | – | |
| TMHMM | 421 | 443 | 23 | – | – | |
| Phobius | 439 | 446 | 8 | – | – | |
| Phobius | 447 | 463 | 17 | – | – | |
| TMHMM | 463 | 485 | 23 | – | – | |
| Phobius | 464 | 468 | 5 | – | – | |
| Phobius | 469 | 486 | 18 | – | – | |
| Phobius | 487 | 497 | 11 | – | – | |
| Phobius | 498 | 519 | 22 | – | – | |
| TMHMM | 506 | 528 | 23 | – | – | |
| Phobius | 520 | 554 | 35 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v1008860.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1008860.3, powered by CORGI.
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