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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1091030 |
| Transcript ID | Lj1g3v1091030.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Peroxidase [Medicago truncatula] gi|357464247|ref|XP_003602405.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| Phobius | 5 | 15 | 11 | – | – | |
| PANTHER | 6 | 324 | 319 | 1.30E-227 | – | |
| Phobius | 16 | 21 | 6 | – | – | |
| ProSiteProfiles | 22 | 323 | 302 | 76.864 | ||
| CDD | 22 | 322 | 301 | 0 | ||
| Phobius | 22 | 324 | 303 | – | – | |
| SUPERFAMILY | 23 | 323 | 301 | 1.47E-110 | ||
| Gene3D | 31 | 174 | 144 | 1.10E-36 | – | |
| PRINTS | 32 | 51 | 20 | 4.10E-53 | ||
| Pfam | 39 | 287 | 249 | 4.20E-77 | ||
| PRINTS | 54 | 68 | 15 | 4.80E-28 | ||
| ProSitePatterns | 54 | 65 | 12 | – | ||
| PRINTS | 56 | 76 | 21 | 4.10E-53 | ||
| PRINTS | 96 | 109 | 14 | 4.10E-53 | ||
| PRINTS | 115 | 125 | 11 | 4.10E-53 | ||
| PRINTS | 116 | 133 | 18 | 4.80E-28 | ||
| PRINTS | 134 | 146 | 13 | 4.80E-28 | ||
| PRINTS | 134 | 149 | 16 | 4.10E-53 | ||
| Gene3D | 175 | 302 | 128 | 1.50E-47 | – | |
| PRINTS | 181 | 193 | 13 | 4.10E-53 | ||
| PRINTS | 182 | 197 | 16 | 4.80E-28 | ||
| ProSitePatterns | 182 | 192 | 11 | – | ||
| PRINTS | 241 | 256 | 16 | 4.10E-53 | ||
| PRINTS | 243 | 258 | 16 | 4.80E-28 | ||
| PRINTS | 257 | 274 | 18 | 4.10E-53 | ||
| PRINTS | 297 | 310 | 14 | 4.10E-53 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Hydrogen peroxide catabolic process | The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2). | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v1091030.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1091030.1, powered by CORGI.
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