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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1255840 |
| Transcript ID | Lj1g3v1255840.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: WAT1-related protein At5g64700-like [Cicer arietinum] gi|502136915|ref|XP_004502894.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | – | – | |
| PANTHER | 5 | 208 | 204 | 4.90E-101 | ||
| PANTHER | 5 | 208 | 204 | 4.90E-101 | – | |
| Phobius | 16 | 36 | 21 | – | – | |
| TMHMM | 21 | 38 | 18 | – | – | |
| Phobius | 37 | 68 | 32 | – | – | |
| TMHMM | 69 | 88 | 20 | – | – | |
| Phobius | 69 | 89 | 21 | – | – | |
| Pfam | 71 | 206 | 136 | 1.70E-12 | ||
| Phobius | 90 | 100 | 11 | – | – | |
| Phobius | 101 | 122 | 22 | – | – | |
| Phobius | 123 | 133 | 11 | – | – | |
| Phobius | 134 | 153 | 20 | – | – | |
| TMHMM | 137 | 159 | 23 | – | – | |
| SUPERFAMILY | 138 | 206 | 69 | 7.59E-06 | – | |
| Phobius | 154 | 164 | 11 | – | – | |
| Phobius | 165 | 184 | 20 | – | – | |
| TMHMM | 174 | 205 | 32 | – | – | |
| Phobius | 185 | 189 | 5 | – | – | |
| Phobius | 190 | 207 | 18 | – | – | |
| Phobius | 208 | 208 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj1g3v1255840.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1255840.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.