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Lj1g3v1303700.1

Overview

Field Value
Gene ID Lj1g3v1303700
Transcript ID Lj1g3v1303700.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor HEC3-like [Cicer arietinum] gi|502140224|ref|XP_004504117.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12565:SF125
80 188 109 7.80E-80 –
PANTHER
PTHR12565
80 188 109 7.80E-80 –
ProSiteProfiles
PS50888
131 180 50 14.723
IPR011598
CDD
cd00083
137 185 49 3.38E-11 –
Gene3D
G3DSA:4.10.280.10
137 191 55 2.80E-12
IPR011598
SMART
SM00353
137 186 50 1.20E-12
IPR011598
SUPERFAMILY
SSF47459
140 205 66 1.44E-14
IPR011598
Pfam
PF00010
141 180 40 7.30E-06
IPR011598
MobiDBLite
mobidb-lite
190 210 21 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj1g3v1303700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v1303700.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.