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Lj1g3v1318120.1

Overview

Field Value
Gene ID Lj1g3v1318120
Transcript ID Lj1g3v1318120.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: chromatin assembly factor 1 subunit FAS2-like [Cicer arietinum] gi|502139869|ref|XP_004503945.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR15271
2 129 128 7.10E-60 –
SMART
SM00320
2 41 40 0.0075
IPR001680
Gene3D
G3DSA:2.130.10.10
9 129 121 2.20E-24
IPR015943
ProSiteProfiles
PS50294
9 129 121 18.352
IPR017986
Pfam
PF00400
10 40 31 0.001
IPR001680
SUPERFAMILY
SSF50978
13 128 116 3.66E-22
IPR017986
ProSiteProfiles
PS50082
16 43 28 9.272
IPR001680
SMART
SM00320
54 93 40 2.80E-04
IPR001680
ProSiteProfiles
PS50082
61 102 42 12.447
IPR001680
Pfam
PF00400
61 92 32 0.0065
IPR001680
Pfam
PF00400
103 129 27 0.0051
IPR001680

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj1g3v1318120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v1318120.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.