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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1353710 |
| Transcript ID | Lj1g3v1353710.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DNA polymerase delta catalytic subunit-like [Cicer arietinum] gi|502137074|ref|XP_004502958.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 25 | 25 | – | – | |
| PANTHER | 34 | 601 | 568 | 1.40E-303 | – | |
| PANTHER | 34 | 601 | 568 | 1.40E-303 | – | |
| SUPERFAMILY | 100 | 522 | 423 | 1.95E-103 | ||
| Pfam | 109 | 452 | 344 | 3.70E-87 | ||
| CDD | 279 | 508 | 230 | 1.03E-162 | – | |
| SMART | 283 | 601 | 319 | 6.40E-67 | ||
| Gene3D | 286 | 502 | 217 | 9.90E-77 | ||
| Pfam | 510 | 601 | 92 | 1.40E-32 | ||
| SUPERFAMILY | 525 | 601 | 77 | 2.72E-22 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-directed DNA polymerase activity | Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and a 3'hydroxyl group. |
Expression pattern of Lj1g3v1353710.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1353710.1, powered by CORGI.
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