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Lj1g3v1362060.1

Overview

Field Value
Gene ID Lj1g3v1362060
Transcript ID Lj1g3v1362060.1
Lotus japonicus genome version MG20 v3.0
Description Uncharacterized protein TCM_008613 [Theobroma cacao] gi|508707851|gb|EOX99747.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 56 56
MobiDBLite 1 47 47
SignalP 1 21 21
PANTHER 2 177 176 4.80E-90
PANTHER 2 177 176 4.80E-90
Phobius 57 74 18
TMHMM 60 82 23
Phobius 75 79 5
Phobius 80 98 19
Phobius 99 118 20
Phobius 119 137 19
TMHMM 121 143 23
Phobius 138 156 19
Phobius 157 176 20
Phobius 177 181 5

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj1g3v1362060.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v1362060.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.