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Lj1g3v1380870.2

Overview

Field Value
Gene ID Lj1g3v1380870
Transcript ID Lj1g3v1380870.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 1-like [Cicer arietinum] gi|502137205|ref|XP_004503007.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 31 31
PANTHER 25 696 672 0
PANTHER 25 696 672 0
SUPERFAMILY 58 144 87 4.71E-23
SMART 60 81 22 0.061
Pfam 68 84 17 0.004
SMART 83 104 22 0.0017
Pfam 85 106 22 6.90E-07
Gene3D 89 211 123 2.00E-30
SMART 106 127 22 0.023
Pfam 108 128 21 0.0029
SUPERFAMILY 128 213 86 3.53E-20
SMART 129 150 22 0.1
Pfam 131 153 23 0.0027
SMART 152 173 22 0.0021
Pfam 154 175 22 0.024
SMART 175 196 22 0.0022
Pfam 177 199 23 5.50E-06
SMART 198 224 27 18
Gene3D 293 472 180 1.30E-64
ProSiteProfiles 300 693 394 67.644
SUPERFAMILY 301 693 393 2.75E-118
CDD 305 693 389 1.55E-135
SMART 331 694 364 2.60E-165
Pfam 392 692 301 1.30E-92
Gene3D 473 572 100 6.70E-45
Gene3D 620 693 74 6.70E-45

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Phosphatidylinositol phosphate kinase activity Catalysis of the reaction: ATP + a phosphatidylinositol phosphate = ADP + a phosphatidylinositol bisphosphate.
Biological process Phosphatidylinositol metabolic process The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid in which a sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.

Expression data

Expression pattern

Expression pattern of Lj1g3v1380870.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v1380870.2, powered by CORGI.

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