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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR027484
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 45 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.958s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0050169.1
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 1-like [Glycine max] gi|356527554|ref|XP_003532374.1| chr0 17023169 17027565 +
2 domain predictions
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Lj0g3v0072529.1
n.a. PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 1-like [Cicer arietinum] gi|502166243|ref|XP_004513834.1| chr0 26922477 26926824 +
2 domain predictions
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Lj0g3v0072529.2
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 1-like [Glycine max] gi|356551586|ref|XP_003544155.1| chr0 26924554 26926824 +
2 domain predictions
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Lj0g3v0258569.1
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 6-like [Glycine max] gi|356556815|ref|XP_003546716.1| chr0 134245278 134249652 -
2 domain predictions
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Lj0g3v0263929.1
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 4-like [Glycine max] gi|356500325|ref|XP_003518983.1| chr0 136846403 136847793 +
2 domain predictions
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Lj0g3v0306249.1
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 1-like [Glycine max] gi|356515848|ref|XP_003526609.1| chr0 159747954 159752531 +
2 domain predictions
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Lj1g3v1380870.1
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 1-like [Glycine max] gi|356507422|ref|XP_003522466.1| chr1 16668866 16675161 -
2 domain predictions
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Lj1g3v1380870.2
n.a. PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 1-like [Cicer arietinum] gi|502137205|ref|XP_004503007.1| chr1 16668866 16675161 -
2 domain predictions
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Lj1g3v4144860.1
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 4-like [Glycine max] gi|356571937|ref|XP_003554127.1| chr1 49242845 49244285 +
2 domain predictions
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Lj1g3v4668120.1
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 9-like [Glycine max] gi|356505279|ref|XP_003521419.1| chr1 55386565 55398671 -
2 domain predictions
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Lj3g3v0766130.1
n.a. PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 6-like [Cicer arietinum] gi|502124837|ref|XP_004498693.1| chr3 9200498 9205675 -
2 domain predictions
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Lj3g3v2575590.1
n.a. PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like [Cicer arietinum] gi|502156622|ref|XP_004510566.1| chr3 31265369 31276094 -
2 domain predictions
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Lj4g3v2215310.1
n.a. PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase-like [Glycine max] gi|356547984|ref|XP_003542384.1| chr4 30646688 30657932 +
2 domain predictions
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Lj4g3v2704630.1
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 7-like [Glycine max] gi|356511035|ref|XP_003524237.1| chr4 36381339 36388840 +
2 domain predictions
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Lj4g3v2704630.2
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 7-like [Glycine max] gi|356525381|ref|XP_003531303.1| chr4 36381339 36387619 +
2 domain predictions
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Lj4g3v2704630.3
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 7-like [Glycine max] gi|356525381|ref|XP_003531303.1| chr4 36381548 36386071 +
2 domain predictions
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Lj4g3v2704630.4
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 7-like [Glycine max] gi|356525381|ref|XP_003531303.1| chr4 36381561 36387337 +
2 domain predictions
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Lj4g3v2846360.1
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 1-like [Glycine max] gi|356527554|ref|XP_003532374.1| chr4 38140974 38145370 -
2 domain predictions
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Lj5g3v0670630.1
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 9-like [Glycine max] gi|356533289|ref|XP_003535198.1| chr5 9751125 9763360 -
2 domain predictions
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Lj6g3v0072130.1
n.a. phosphatidylinositol-4-phosphate 5-kinase family protein [Arabidopsis lyrata subsp]. lyrata] gi|297846424|ref|XP_002891093.1| chr6 1052354 1055628 -
2 domain predictions
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Lj6g3v2273260.1
n.a. PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 8-like [Glycine max] gi|356557497|ref|XP_003547052.1| chr6 26348492 26354181 -
2 domain predictions
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LotjaGi1g1v0152500.1
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT1G21980.1 phosphatidylinositol-4-phosphate 5-kinase 1; Swiss-Prot: sp|Q56YP2|PI5K1_ARATH Phosphatidylinositol 4-phosphate 5-kinase 1; TrEMBL-Plants: tr|A0A072UQ95|A0A072UQ95_MEDTR Phosphatidylinositol-4-phosphate 5-kinase family protein; Found in the gene: LotjaGi1g1v0152500 LjG1.1_chr1 26246184 26251255 -
2 domain predictions
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LotjaGi1g1v0254500.1
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT1G77740.1 phosphatidylinositol-4-phosphate 5-kinase 2; Swiss-Prot: sp|Q8L796|PI5K2_ARATH Phosphatidylinositol 4-phosphate 5-kinase 2; TrEMBL-Plants: tr|V7B8A9|V7B8A9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0254500 LjG1.1_chr1 61269806 61275200 -
2 domain predictions
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LotjaGi1g1v0254500.2
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT1G21980.1 phosphatidylinositol-4-phosphate 5-kinase 1; Swiss-Prot: sp|Q56YP2|PI5K1_ARATH Phosphatidylinositol 4-phosphate 5-kinase 1; TrEMBL-Plants: tr|I1KA55|I1KA55_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0254500 LjG1.1_chr1 61269806 61275200 -
2 domain predictions
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LotjaGi1g1v0254500.3
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT1G21980.1 phosphatidylinositol-4-phosphate 5-kinase 1; Swiss-Prot: sp|Q56YP2|PI5K1_ARATH Phosphatidylinositol 4-phosphate 5-kinase 1; TrEMBL-Plants: tr|V7B8A9|V7B8A9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0254500 LjG1.1_chr1 61271079 61274811 -
2 domain predictions
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LotjaGi1g1v0664200.1
n.a. Phosphatidylinositol-4-phosphate 5-kinase 4; TAIR: AT3G56960.1 phosphatidyl inositol monophosphate 5 kinase 4; Swiss-Prot: sp|Q9M1K2|PI5K4_ARATH Phosphatidylinositol 4-phosphate 5-kinase 4; TrEMBL-Plants: tr|I1N8S8|I1N8S8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0664200 LjG1.1_chr1 122579647 122584721 +
2 domain predictions
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LotjaGi1g1v0664200.2
n.a. Phosphatidylinositol-4-phosphate 5-kinase 4; TAIR: AT3G56960.1 phosphatidyl inositol monophosphate 5 kinase 4; Swiss-Prot: sp|Q9M1K2|PI5K4_ARATH Phosphatidylinositol 4-phosphate 5-kinase 4; TrEMBL-Plants: tr|I1N8S8|I1N8S8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0664200 LjG1.1_chr1 122579647 122584721 +
2 domain predictions
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LotjaGi1g1v0685600.1
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT3G09920.1 phosphatidyl inositol monophosphate 5 kinase; Swiss-Prot: sp|Q8L850|PI5K9_ARATH Phosphatidylinositol 4-phosphate 5-kinase 9; TrEMBL-Plants: tr|A0A151U350|A0A151U350_CAJCA Phosphatidylinositol-4-phosphate 5-kinase 9; Found in the gene: LotjaGi1g1v0685600 LjG1.1_chr1 125247053 125252564 +
2 domain predictions
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LotjaGi3g1v0109700.1
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT3G07960.1 Phosphatidylinositol-4-phosphate 5-kinase family protein; Swiss-Prot: sp|Q9SFB8|PI5K6_ARATH Phosphatidylinositol 4-phosphate 5-kinase 6; TrEMBL-Plants: tr|A0A1J7IE89|A0A1J7IE89_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0109700 LjG1.1_chr3 13545162 13550961 +
2 domain predictions
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LotjaGi3g1v0318000.1
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT3G07960.1 Phosphatidylinositol-4-phosphate 5-kinase family protein; Swiss-Prot: sp|Q9SFB8|PI5K6_ARATH Phosphatidylinositol 4-phosphate 5-kinase 6; TrEMBL-Plants: tr|A0A151RG26|A0A151RG26_CAJCA Phosphatidylinositol-4-phosphate 5-kinase 6; Found in the gene: LotjaGi3g1v0318000 LjG1.1_chr3 67320205 67325357 +
2 domain predictions
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LotjaGi3g1v0408200.1
n.a. 1-phosphatidylinositol-3-phosphate 5-kinase; TAIR: AT3G14270.1 phosphatidylinositol-4-phosphate 5-kinase family protein; Swiss-Prot: sp|Q9LUM0|FAB1B_ARATH 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B; TrEMBL-Plants: tr|A0A0B2NWD6|A0A0B2NWD6_GLYSO 1-phosphatidylinositol-3-phosphate 5-kinase FAB1; Found in the gene: LotjaGi3g1v0408200 LjG1.1_chr3 81156327 81167287 -
2 domain predictions
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LotjaGi4g1v0079500.1
n.a. 1-phosphatidylinositol-3-phosphate 5-kinase; TAIR: AT1G71010.1 FORMS APLOID AND BINUCLEATE CELLS 1C; Swiss-Prot: sp|Q9SSJ8|FAB1C_ARATH Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C; TrEMBL-Plants: tr|I1KM34|I1KM34_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0079500 LjG1.1_chr4 10398131 10407397 +
2 domain predictions
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LotjaGi4g1v0319600.1
n.a. 1-phosphatidylinositol-3-phosphate 5-kinase; TAIR: AT3G14270.1 phosphatidylinositol-4-phosphate 5-kinase family protein; Swiss-Prot: sp|Q9LUM0|FAB1B_ARATH 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B; TrEMBL-Plants: tr|A0A0B2Q844|A0A0B2Q844_GLYSO 1-phosphatidylinositol-3-phosphate 5-kinase FAB1; Found in the gene: LotjaGi4g1v0319600 LjG1.1_chr4 69713858 69732276 -
2 domain predictions
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LotjaGi4g1v0319600.2
n.a. 1-phosphatidylinositol-3-phosphate 5-kinase; TAIR: AT3G14270.1 phosphatidylinositol-4-phosphate 5-kinase family protein; Swiss-Prot: sp|Q9LUM0|FAB1B_ARATH 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B; TrEMBL-Plants: tr|A0A0B2Q844|A0A0B2Q844_GLYSO 1-phosphatidylinositol-3-phosphate 5-kinase FAB1; Found in the gene: LotjaGi4g1v0319600 LjG1.1_chr4 69720170 69732111 -
2 domain predictions
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LotjaGi4g1v0388800.1
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT1G60890.1 Phosphatidylinositol-4-phosphate 5-kinase family protein; Swiss-Prot: sp|Q8RY89|PI5K8_ARATH Phosphatidylinositol 4-phosphate 5-kinase 8; TrEMBL-Plants: tr|I1K4B1|I1K4B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0388800 LjG1.1_chr4 76722468 76730050 +
2 domain predictions
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LotjaGi4g1v0388800.2
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT1G60890.1 Phosphatidylinositol-4-phosphate 5-kinase family protein; Swiss-Prot: sp|Q8RY89|PI5K8_ARATH Phosphatidylinositol 4-phosphate 5-kinase 8; TrEMBL-Plants: tr|K7L6A7|K7L6A7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0388800 LjG1.1_chr4 76722904 76729991 +
2 domain predictions
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LotjaGi4g1v0415400.1
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT1G21980.1 phosphatidylinositol-4-phosphate 5-kinase 1; Swiss-Prot: sp|Q56YP2|PI5K1_ARATH Phosphatidylinositol 4-phosphate 5-kinase 1; TrEMBL-Plants: tr|I1KNZ5|I1KNZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0415400 LjG1.1_chr4 79089134 79094500 -
2 domain predictions
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LotjaGi5g1v0085000.1
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT3G09920.1 phosphatidyl inositol monophosphate 5 kinase; Swiss-Prot: sp|Q8L850|PI5K9_ARATH Phosphatidylinositol 4-phosphate 5-kinase 9; TrEMBL-Plants: tr|A0A151U350|A0A151U350_CAJCA Phosphatidylinositol-4-phosphate 5-kinase 9; Found in the gene: LotjaGi5g1v0085000 LjG1.1_chr5 14594185 14606536 -
2 domain predictions
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LotjaGi5g1v0085000.2
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT3G09920.1 phosphatidyl inositol monophosphate 5 kinase; Swiss-Prot: sp|Q8L850|PI5K9_ARATH Phosphatidylinositol 4-phosphate 5-kinase 9; TrEMBL-Plants: tr|A0A151U350|A0A151U350_CAJCA Phosphatidylinositol-4-phosphate 5-kinase 9; Found in the gene: LotjaGi5g1v0085000 LjG1.1_chr5 14594746 14605267 -
2 domain predictions
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LotjaGi5g1v0123600.1
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT3G56960.1 phosphatidyl inositol monophosphate 5 kinase 4; Swiss-Prot: sp|Q9M1K2|PI5K4_ARATH Phosphatidylinositol 4-phosphate 5-kinase 4; TrEMBL-Plants: tr|K7K8Q4|K7K8Q4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0123600 LjG1.1_chr5 25984463 25999648 -
2 domain predictions
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LotjaGi5g1v0123600.2
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT3G56960.1 phosphatidyl inositol monophosphate 5 kinase 4; Swiss-Prot: sp|Q9M1K2|PI5K4_ARATH Phosphatidylinositol 4-phosphate 5-kinase 4; TrEMBL-Plants: tr|G7I7V8|G7I7V8_MEDTR Phosphatidylinositol-4-phosphate 5-kinase family protein; Found in the gene: LotjaGi5g1v0123600 LjG1.1_chr5 25984875 25999387 -
2 domain predictions
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LotjaGi5g1v0123600.3
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT3G56960.1 phosphatidyl inositol monophosphate 5 kinase 4; Swiss-Prot: sp|Q9M1K2|PI5K4_ARATH Phosphatidylinositol 4-phosphate 5-kinase 4; TrEMBL-Plants: tr|K7K8Q4|K7K8Q4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0123600 LjG1.1_chr5 25984875 25999387 -
2 domain predictions
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LotjaGi5g1v0283000.1
n.a. 1-phosphatidylinositol-3-phosphate 5-kinase; TAIR: AT1G34260.1 FORMS APLOID AND BINUCLEATE CELLS 1A; Swiss-Prot: sp|Q9XID0|FAB1D_ARATH Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D; TrEMBL-Plants: tr|K7N417|K7N417_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283000 LjG1.1_chr5 59933773 59944193 -
2 domain predictions
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LotjaGi6g1v0360000_LC.1
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT1G10900.1 Phosphatidylinositol-4-phosphate 5-kinase family protein; Swiss-Prot: sp|Q9SUI2|PI5K7_ARATH Phosphatidylinositol 4-phosphate 5-kinase 7; TrEMBL-Plants: tr|V7BTZ4|V7BTZ4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0360000_LC LjG1.1_chr6 67146096 67153532 -
2 domain predictions
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LotjaGi6g1v0360000_LC.2
n.a. Phosphatidylinositol-4-phosphate 5-kinase family protein; TAIR: AT1G10900.1 Phosphatidylinositol-4-phosphate 5-kinase family protein; Swiss-Prot: sp|Q9SUI2|PI5K7_ARATH Phosphatidylinositol 4-phosphate 5-kinase 7; TrEMBL-Plants: tr|V7BTZ4|V7BTZ4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0360000_LC LjG1.1_chr6 67146469 67153495 -
2 domain predictions
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