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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1387070 |
| Transcript ID | Lj1g3v1387070.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-2-like [Glycine max] gi|356527405|ref|XP_003532301.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 20 | 194 | 175 | 5.48E-35 | ||
| ProSiteProfiles | 26 | 61 | 36 | 6.758 | ||
| Gene3D | 28 | 165 | 138 | 1.90E-29 | ||
| ProSiteProfiles | 62 | 97 | 36 | 11.975 | ||
| Pfam | 64 | 93 | 30 | 0.023 | ||
| SMART | 66 | 94 | 29 | 0.013 | ||
| ProSitePatterns | 75 | 87 | 13 | – | ||
| SMART | 97 | 125 | 29 | 7.1 | ||
| Pfam | 97 | 156 | 60 | 1.70E-08 | ||
| CDD | 97 | 158 | 62 | 1.71E-10 | ||
| ProSiteProfiles | 98 | 128 | 31 | 8.432 | ||
| ProSiteProfiles | 129 | 164 | 36 | 12.979 | ||
| PANTHER | 132 | 156 | 25 | 1.20E-179 | – | |
| PANTHER | 132 | 156 | 25 | 1.20E-179 | – | |
| SMART | 133 | 161 | 29 | 1.2 | ||
| ProSitePatterns | 142 | 154 | 13 | – | ||
| SUPERFAMILY | 194 | 472 | 279 | 6.80E-79 | ||
| Gene3D | 196 | 475 | 280 | 2.10E-92 | ||
| ProSiteProfiles | 196 | 279 | 84 | 19.788 | ||
| Pfam | 200 | 281 | 82 | 4.90E-22 | ||
| PRINTS | 201 | 214 | 14 | 3.30E-28 | ||
| PANTHER | 202 | 477 | 276 | 1.20E-179 | – | |
| PANTHER | 202 | 477 | 276 | 1.20E-179 | – | |
| PRINTS | 214 | 228 | 15 | 3.30E-28 | ||
| PRINTS | 254 | 274 | 21 | 3.30E-28 | ||
| ProSiteProfiles | 290 | 377 | 88 | 20.454 | ||
| Pfam | 290 | 378 | 89 | 9.80E-22 | ||
| PRINTS | 305 | 323 | 19 | 3.30E-28 | ||
| PRINTS | 350 | 368 | 19 | 3.30E-28 | ||
| ProSiteProfiles | 388 | 476 | 89 | 25.838 | ||
| Pfam | 390 | 477 | 88 | 1.30E-24 | ||
| PRINTS | 397 | 419 | 23 | 3.30E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP transmembrane transporter activity | Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v1387070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1387070.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.