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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1605280 |
| Transcript ID | Lj1g3v1605280.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | TRNA-processing ribonuclease BN [Theobroma cacao] gi|508722755|gb|EOY14652.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 146 | 146 | – | – | |
| PANTHER | 6 | 84 | 79 | 2.30E-182 | – | |
| PANTHER | 6 | 84 | 79 | 2.30E-182 | – | |
| PANTHER | 104 | 367 | 264 | 2.30E-182 | – | |
| PANTHER | 104 | 367 | 264 | 2.30E-182 | – | |
| TMHMM | 146 | 168 | 23 | – | – | |
| Phobius | 147 | 167 | 21 | – | – | |
| Phobius | 168 | 178 | 11 | – | – | |
| Phobius | 179 | 204 | 26 | – | – | |
| TMHMM | 183 | 204 | 22 | – | – | |
| Phobius | 205 | 224 | 20 | – | – | |
| Phobius | 225 | 250 | 26 | – | – | |
| TMHMM | 227 | 249 | 23 | – | – | |
| Phobius | 251 | 255 | 5 | – | – | |
| TMHMM | 253 | 275 | 23 | – | – | |
| Phobius | 256 | 275 | 20 | – | – | |
| Phobius | 276 | 331 | 56 | – | – | |
| Phobius | 332 | 358 | 27 | – | – | |
| TMHMM | 336 | 358 | 23 | – | – | |
| Phobius | 359 | 367 | 9 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v1605280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1605280.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.