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Lj1g3v1720140.2

Overview

Field Value
Gene ID Lj1g3v1720140
Transcript ID Lj1g3v1720140.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: arginine N-methyltransferase 2 [Glycine max] gi|356514465|ref|XP_003525926.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR32379
1 327 327 4.40E-152 –
PANTHER
PTHR32379:SF1
1 327 327 4.40E-152 –
ProSiteProfiles
PS50297
3 93 91 21.588
IPR020683
SMART
SM00248
3 32 30 630
IPR002110
Gene3D
G3DSA:1.25.40.20
6 98 93 1.20E-19
IPR020683
SUPERFAMILY
SSF48403
8 96 89 1.87E-19
IPR020683
CDD
cd00204
8 93 86 2.12E-18 –
Pfam
PF12796
8 95 88 1.30E-10
IPR020683
ProSiteProfiles
PS50088
36 68 33 11.301
IPR002110
SMART
SM00248
36 65 30 7.30E-04
IPR002110
SMART
SM00248
69 98 30 3000
IPR002110
ProSiteProfiles
PS51559
110 328 219 62.523
IPR026480
Gene3D
G3DSA:3.40.50.150
118 324 207 8.80E-74
IPR029063
SUPERFAMILY
SSF53335
123 323 201 5.14E-35
IPR029063
CDD
cd02440
162 257 96 3.84E-06 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 11

Expression data

Expression pattern

Expression pattern of Lj1g3v1720140.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v1720140.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.