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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1732390 |
| Transcript ID | Lj1g3v1732390.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Xanthine/uracil/vitamin C permease [Medicago truncatula] gi|357483775|ref|XP_003612174.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | – | – | |
| PANTHER | 1 | 175 | 175 | 1.80E-121 | ||
| PANTHER | 1 | 175 | 175 | 1.80E-121 | – | |
| Pfam | 2 | 104 | 103 | 4.70E-23 | ||
| TMHMM | 28 | 50 | 23 | – | – | |
| Phobius | 28 | 50 | 23 | – | – | |
| Phobius | 51 | 55 | 5 | – | – | |
| TMHMM | 54 | 76 | 23 | – | – | |
| Phobius | 56 | 76 | 21 | – | – | |
| Phobius | 77 | 87 | 11 | – | – | |
| Phobius | 88 | 105 | 18 | – | – | |
| TMHMM | 88 | 105 | 18 | – | – | |
| Phobius | 106 | 116 | 11 | – | – | |
| Phobius | 117 | 140 | 24 | – | – | |
| TMHMM | 118 | 140 | 23 | – | – | |
| Phobius | 141 | 179 | 39 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v1732390.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1732390.1, powered by CORGI.
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