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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1810140 |
| Transcript ID | Lj1g3v1810140.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: lariat debranching enzyme-like [Cicer arietinum] gi|502133507|ref|XP_004501789.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 327 | 327 | 1.80E-224 | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| PANTHER | 1 | 327 | 327 | 1.80E-224 | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 18 | 25 | 8 | – | – | |
| Phobius | 26 | 327 | 302 | – | – | |
| ProSiteProfiles | 28 | 326 | 299 | 70.897 | ||
| CDD | 29 | 322 | 294 | 4.42E-143 | ||
| SUPERFAMILY | 29 | 326 | 298 | 2.50E-96 | ||
| Gene3D | 35 | 177 | 143 | 6.90E-30 | – | |
| PRINTS | 38 | 57 | 20 | 7.50E-49 | ||
| Pfam | 47 | 290 | 244 | 1.60E-73 | ||
| PRINTS | 60 | 74 | 15 | 7.20E-32 | ||
| PRINTS | 62 | 82 | 21 | 7.50E-49 | ||
| PRINTS | 98 | 111 | 14 | 7.50E-49 | ||
| PRINTS | 117 | 127 | 11 | 7.50E-49 | ||
| PRINTS | 118 | 135 | 18 | 7.20E-32 | ||
| PRINTS | 136 | 151 | 16 | 7.50E-49 | ||
| PRINTS | 136 | 148 | 13 | 7.20E-32 | ||
| Gene3D | 178 | 305 | 128 | 6.40E-45 | – | |
| PRINTS | 183 | 195 | 13 | 7.50E-49 | ||
| PRINTS | 184 | 199 | 16 | 7.20E-32 | ||
| ProSitePatterns | 184 | 194 | 11 | – | ||
| PRINTS | 244 | 259 | 16 | 7.50E-49 | ||
| PRINTS | 246 | 261 | 16 | 7.20E-32 | ||
| PRINTS | 260 | 277 | 18 | 7.50E-49 | ||
| PRINTS | 300 | 313 | 14 | 7.50E-49 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Hydrogen peroxide catabolic process | The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2). | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v1810140.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1810140.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.