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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2127280 |
| Transcript ID | Lj1g3v2127280.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Sec14p-like phosphatidylinositol transfer family protein isoform 1 [Theobroma cacao] gi|508706052|gb|EOX97948.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 332 | 327 | 0 | – | |
| PANTHER | 6 | 332 | 327 | 0 | – | |
| MobiDBLite | 8 | 30 | 23 | – | – | |
| Gene3D | 17 | 53 | 37 | 4.00E-14 | – | |
| SUPERFAMILY | 70 | 135 | 66 | 6.41E-17 | ||
| Pfam | 91 | 115 | 25 | 3.50E-06 | ||
| Gene3D | 92 | 121 | 30 | 4.00E-14 | – | |
| SMART | 94 | 119 | 26 | 8.20E-07 | ||
| PRINTS | 97 | 119 | 23 | 7.40E-06 | ||
| Gene3D | 122 | 329 | 208 | 1.70E-80 | ||
| CDD | 137 | 307 | 171 | 4.65E-38 | – | |
| ProSiteProfiles | 139 | 313 | 175 | 25.521 | ||
| SMART | 139 | 310 | 172 | 3.50E-51 | ||
| SUPERFAMILY | 139 | 331 | 193 | 5.49E-58 | ||
| Pfam | 143 | 308 | 166 | 2.00E-34 | ||
| PRINTS | 266 | 285 | 20 | 7.40E-06 | ||
| MobiDBLite | 357 | 396 | 40 | – | – | |
| PANTHER | 414 | 582 | 169 | 0 | – | |
| PANTHER | 414 | 582 | 169 | 0 | – | |
| MobiDBLite | 487 | 511 | 25 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v2127280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2127280.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.