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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2359030 |
| Transcript ID | Lj1g3v2359030.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Beta-glucosidase [Medicago truncatula] gi|357468871|ref|XP_003604720.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 26 | 26 | – | – | |
| SignalP | 1 | 14 | 14 | – | – | |
| PANTHER | 1 | 470 | 470 | 7.60E-301 | ||
| Phobius | 1 | 19 | 19 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| PANTHER | 1 | 470 | 470 | 7.60E-301 | – | |
| Phobius | 4 | 14 | 11 | – | – | |
| TMHMM | 5 | 24 | 20 | – | – | |
| Phobius | 15 | 19 | 5 | – | – | |
| Phobius | 20 | 470 | 451 | – | – | |
| Gene3D | 23 | 470 | 448 | 1.40E-178 | ||
| SUPERFAMILY | 28 | 470 | 443 | 1.17E-152 | ||
| Pfam | 36 | 470 | 435 | 5.70E-140 | ||
| ProSitePatterns | 38 | 52 | 15 | – | ||
| PRINTS | 330 | 344 | 15 | 3.60E-15 | ||
| PRINTS | 402 | 410 | 9 | 3.60E-15 | ||
| PRINTS | 419 | 430 | 12 | 3.60E-15 | ||
| PRINTS | 440 | 457 | 18 | 3.60E-15 | ||
| PRINTS | 464 | 470 | 7 | 3.60E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of Lj1g3v2359030.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2359030.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.