Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj1g3v2393300.1

Overview

Field Value
Gene ID Lj1g3v2393300
Transcript ID Lj1g3v2393300.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: aldose reductase-like [Glycine max] gi|356566736|ref|XP_003551585.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11732:SF164
11 122 112 6.20E-217 –
PANTHER
PTHR11732
11 122 112 6.20E-217
IPR001395
Gene3D
G3DSA:3.20.20.100
14 186 173 6.30E-62
IPR023210
SUPERFAMILY
SSF51430
17 272 256 1.44E-71
IPR023210
CDD
cd06660
19 265 247 9.82E-56
IPR023210
Pfam
PF00248
26 188 163 1.90E-29
IPR023210
PRINTS
PR00069
45 69 25 7.10E-26
IPR020471
ProSitePatterns
PS00798
49 66 18 –
IPR018170
PRINTS
PR00069
104 122 19 7.10E-26
IPR020471
PANTHER
PTHR11732:SF164
138 294 157 6.20E-217 –
PANTHER
PTHR11732
138 294 157 6.20E-217
IPR001395
ProSitePatterns
PS00062
150 167 18 –
IPR018170
Gene3D
G3DSA:3.20.20.100
187 278 92 9.60E-24
IPR023210
PRINTS
PR00069
201 225 25 7.10E-26
IPR020471
Pfam
PF00248
204 265 62 1.60E-08
IPR023210
ProSitePatterns
PS00063
234 249 16 –
IPR018170

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj1g3v2393300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2393300.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.