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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001395
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 50 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.872s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0001739.1
n.a. NAD(P)H-dependent 6'-deoxychalcone synthase [Medicago truncatula] gi|357462577|ref|XP_003601570.1| chr0 467239 468833 -
2 domain predictions
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Lj0g3v0001769.1
n.a. NAD(P)H-dependent 6'-deoxychalcone synthase [Medicago truncatula] gi|357462577|ref|XP_003601570.1| chr0 474402 476105 +
2 domain predictions
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Lj0g3v0058299.1
n.a. NAD(P)-linked oxidoreductase superfamily protein isoform 1 [Theobroma cacao] gi|508701174|gb|EOX93070.1| chr0 19164165 19167971 +
2 domain predictions
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Lj0g3v0074069.1
n.a. PREDICTED: probable aldo-keto reductase 1-like [Cicer arietinum] gi|502113572|ref|XP_004494692.1| chr0 27859076 27861840 -
2 domain predictions
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Lj0g3v0074079.1
n.a. probable aldo-keto reductase 1 [Glycine max] gi|351723659|ref|NP_001236007.1| chr0 27862418 27864452 -
2 domain predictions
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Lj0g3v0093139.1
n.a. PREDICTED: probable aldo-keto reductase 1-like [Cicer arietinum] gi|502113575|ref|XP_004494693.1| chr0 38919275 38919871 -
2 domain predictions
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Lj0g3v0100549.1
n.a. PREDICTED: aldo-keto reductase family 4 member C10-like [Cicer arietinum] gi|502171284|ref|XP_004515026.1| chr0 42501417 42506392 +
2 domain predictions
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Lj0g3v0243739.1
n.a. Voltage-gated potassium channel subunit beta-2 [Medicago truncatula] gi|357476093|ref|XP_003608332.1| chr0 126466208 126469887 -
2 domain predictions
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Lj0g3v0281279.1
n.a. polyketide reductase [Lotus japonicus] gi|121309832|dbj|BAF44219.1| chr0 145819988 145820803 +
2 domain predictions
 –
Lj0g3v0295829.1
n.a. Auxin-induced protein PCNT115 [Medicago truncatula] gi|357512293|ref|XP_003626435.1| chr0 153708614 153712404 +
2 domain predictions
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Lj0g3v0295829.2
n.a. PREDICTED: probable aldo-keto reductase 1-like [Cicer arietinum] gi|502113572|ref|XP_004494692.1| chr0 153709478 153712404 +
2 domain predictions
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Lj0g3v0328269.1
n.a. polyketide reductase [Lotus japonicus] gi|121309832|dbj|BAF44219.1| chr0 171587274 171589109 +
2 domain predictions
 –
Lj0g3v0328299.1
n.a. polyketide reductase [Lotus japonicus] gi|121309832|dbj|BAF44219.1| chr0 171594238 171595443 +
2 domain predictions
 –
Lj0g3v0362469.1
n.a. Aldo/keto-reductase family protein [Medicago truncatula] gi|357512299|ref|XP_003626438.1| chr0 191119936 191123521 -
2 domain predictions
 –
Lj0g3v0362469.2
n.a. Aldo/keto-reductase family protein [Medicago truncatula] gi|357512299|ref|XP_003626438.1| chr0 191119936 191123521 -
2 domain predictions
 –
Lj1g3v0112870.1
n.a. PREDICTED: perakine reductase-like isoform X1 [Cicer arietinum] gi|502119585|ref|XP_004496669.1| chr1 1153869 1157310 -
2 domain predictions
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Lj1g3v1036310.1
n.a. PREDICTED: pyridoxal reductase,chloroplastic-like isoform X2 [Cicer arietinum] gi|502136521|ref|XP_004502717.1| chr1 13007260 13011065 -
2 domain predictions
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Lj1g3v1036330.1
n.a. aldo/keto reductase family protein [Arabidopsis lyrata subsp]. lyrata] gi|297796191|ref|XP_002865980.1| chr1 13015420 13016158 -
2 domain predictions
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Lj1g3v2393300.1
n.a. PREDICTED: aldose reductase-like [Glycine max] gi|356566736|ref|XP_003551585.1| chr1 28226473 28230305 +
2 domain predictions
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Lj1g3v3443800.1
n.a. PREDICTED: aldo-keto reductase family 4 member C9-like [Glycine max] gi|356567992|ref|XP_003552198.1| chr1 39835028 39836531 +
2 domain predictions
 –
Lj1g3v4958880.1
n.a. Auxin-induced protein PCNT115 [Medicago truncatula] gi|357512293|ref|XP_003626435.1| chr1 60534317 60536533 -
2 domain predictions
 –
Lj1g3v4958890.1
n.a. Auxin-induced protein PCNT115 [Medicago truncatula] gi|357512287|ref|XP_003626432.1| chr1 60537739 60540711 -
2 domain predictions
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Lj2g3v0635360.1
n.a. PREDICTED: probable NAD(P)H-dependent oxidoreductase 1-like [Glycine max] gi|356560087|ref|XP_003548327.1| chr2 9595922 9602146 -
2 domain predictions
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Lj2g3v0635370.1
n.a. PREDICTED: methylecgonone reductase-like [Cicer arietinum] gi|502164938|ref|XP_004513337.1| chr2 9603036 9605089 -
2 domain predictions
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Lj2g3v0635400.1
n.a. PREDICTED: methylecgonone reductase-like [Cicer arietinum] gi|502172985|ref|XP_004515230.1| chr2 9612646 9613041 -
2 domain predictions
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Lj2g3v0635430.1
n.a. chalcone reductase [Sesbania rostrata] gi|2792155|emb|CAA11226.1| chr2 9620800 9622943 -
2 domain predictions
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Lj2g3v0635440.1
n.a. PREDICTED: probable NAD(P)H-dependent oxidoreductase 2-like [Glycine max] gi|356531108|ref|XP_003534120.1| chr2 9626758 9627284 -
2 domain predictions
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Lj2g3v3339170.1
n.a. polyketide reductase [Lotus japonicus] gi|121309832|dbj|BAF44219.1| chr2 42631044 42632371 -
2 domain predictions
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Lj2g3v3339240.1
n.a. polyketide reductase [Lotus japonicus] gi|121309832|dbj|BAF44219.1| chr2 42642363 42642964 -
2 domain predictions
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Lj2g3v3339350.1
n.a. polyketide reductase [Lotus japonicus] gi|121309832|dbj|BAF44219.1| chr2 42687381 42688859 +
2 domain predictions
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Lj2g3v3339360.1
n.a. polyketide reductase [Lotus japonicus] gi|121309832|dbj|BAF44219.1| chr2 42687381 42688649 +
2 domain predictions
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Lj3g3v0950160.1
n.a. polyketide reductase [Lotus japonicus] gi|121309832|dbj|BAF44219.1| chr3 11959012 11960059 -
2 domain predictions
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Lj3g3v1145900.1
n.a. NAD(P)-linked oxidoreductase superfamily protein isoform 2 [Theobroma cacao] gi|508786238|gb|EOY33494.1| chr3 15508321 15512539 +
2 domain predictions
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Lj3g3v1145900.2
n.a. NAD(P)-linked oxidoreductase superfamily protein isoform 1 [Theobroma cacao] gi|508786237|gb|EOY33493.1| chr3 15509695 15512539 +
2 domain predictions
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Lj3g3v1591680.1
n.a. PREDICTED: aldo-keto reductase family 4 member C9-like [Glycine max] gi|356496078|ref|XP_003516897.1| chr3 20215310 20218337 -
2 domain predictions
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Lj3g3v3396890.1
n.a. PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Cicer arietinum] gi|502149400|ref|XP_004507512.1| chr3 41956517 41958890 +
2 domain predictions
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Lj3g3v3712320.1
n.a. PREDICTED: aldo-keto reductase family 4 member C9-like [Glycine max] gi|356542513|ref|XP_003539711.1| chr3 44975719 44978211 +
2 domain predictions
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Lj3g3v3714380.1
n.a. PREDICTED: aldo-keto reductase family 4 member C9-like [Glycine max] gi|356542513|ref|XP_003539711.1| chr3 45001310 45003450 -
2 domain predictions
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Lj4g3v0410570.2
n.a. Voltage-gated potassium channel subunit beta-2 [Medicago truncatula] gi|357476093|ref|XP_003608332.1| chr4 5301919 5307678 -
2 domain predictions
 –
Lj4g3v0473890.1
n.a. PREDICTED: aldo-keto reductase family 4 member C9-like [Glycine max] gi|356496078|ref|XP_003516897.1| chr4 7505660 7509738 -
2 domain predictions
 –
Lj4g3v2631040.1
n.a. PREDICTED: protein tas-like isoform X2 [Cicer arietinum] gi|502140482|ref|XP_004504232.1| chr4 35920841 35925642 +
2 domain predictions
 –
Lj4g3v2631040.2
n.a. PREDICTED: protein tas-like isoform X3 [Cicer arietinum] gi|502140485|ref|XP_004504233.1| chr4 35920920 35925067 +
2 domain predictions
 –
Lj4g3v2631040.3
n.a. PREDICTED: protein tas-like isoform X4 [Cicer arietinum] gi|502140488|ref|XP_004504234.1| chr4 35920938 35925642 +
2 domain predictions
 –
Lj5g3v0110960.1
n.a. PREDICTED: aldo-keto reductase family 4 member C9-like [Glycine max] gi|356496076|ref|XP_003516896.1| chr5 1273789 1276670 -
2 domain predictions
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Lj5g3v0529160.1
n.a. PREDICTED: NAD(P)H-dependent 6'-deoxychalcone synthase-like [Glycine max] gi|356558518|ref|XP_003547552.1| chr5 5942096 5945163 +
2 domain predictions
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Lj5g3v0529180.1
n.a. PREDICTED: NAD(P)H-dependent 6'-deoxychalcone synthase-like [Glycine max] gi|356558518|ref|XP_003547552.1| chr5 5949858 5950187 +
2 domain predictions
 –
Lj5g3v0529210.1
n.a. PREDICTED: NAD(P)H-dependent 6'-deoxychalcone synthase-like [Glycine max] gi|356558518|ref|XP_003547552.1| chr5 5962637 5962966 +
2 domain predictions
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Lj5g3v2045320.1
n.a. PREDICTED: perakine reductase-like isoform X1 [Cicer arietinum] gi|502119585|ref|XP_004496669.1| chr5 29081378 29084788 +
2 domain predictions
 –
Lj6g3v0028830.1
n.a. Aldo-keto reductase [Medicago truncatula] gi|357439453|ref|XP_003590003.1| chr6 469004 476159 +
2 domain predictions
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Lj6g3v0109720.1
n.a. PREDICTED: probable voltage-gated potassium channel subunit beta-like [Glycine max] gi|356575166|ref|XP_003555713.1| chr6 1409153 1415049 +
2 domain predictions
 –