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Lj1g3v2883900.1

Overview

Field Value
Gene ID Lj1g3v2883900
Transcript ID Lj1g3v2883900.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor bHLH25-like isoform X1 [Cicer arietinum] gi|502106194|ref|XP_004492885.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23042:SF57
1 52 52 1.90E-89 –
PANTHER
PTHR23042
1 52 52 1.90E-89 –
PANTHER
PTHR23042
101 125 25 1.90E-89 –
PANTHER
PTHR23042:SF57
101 125 25 1.90E-89 –
MobiDBLite
mobidb-lite
124 163 40 – –
PANTHER
PTHR23042
150 333 184 1.90E-89 –
PANTHER
PTHR23042:SF57
150 333 184 1.90E-89 –
CDD
cd00083
155 214 60 9.20E-08 –
ProSiteProfiles
PS50888
160 209 50 13.236
IPR011598
SUPERFAMILY
SSF47459
164 224 61 3.14E-14
IPR011598
Gene3D
G3DSA:4.10.280.10
164 222 59 5.80E-14
IPR011598
Pfam
PF00010
165 210 46 4.70E-07
IPR011598
SMART
SM00353
166 215 50 1.40E-08
IPR011598
Coils
Coil
199 226 28 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj1g3v2883900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2883900.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.