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Lj1g3v2994540.1

Overview

Field Value
Gene ID Lj1g3v2994540
Transcript ID Lj1g3v2994540.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description O-methyltransferase [Medicago truncatula] gi|357502091|ref|XP_003621334.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11746
1 250 250 2.50E-113 –
PANTHER
PTHR11746:SF112
1 250 250 2.50E-113 –
Phobius
NON_CYTOPLASMIC_DOMAIN
1 19 19 – –
Gene3D
G3DSA:1.10.10.10
4 121 118 8.80E-29
IPR011991
SUPERFAMILY
SSF46785
17 125 109 1.69E-20
IPR011991
TMHMM
TMhelix
20 39 20 – –
Phobius
TRANSMEMBRANE
20 39 20 – –
ProSiteProfiles
PS51683
23 260 238 38.539
IPR016461
Pfam
PF08100
34 89 56 3.30E-15
IPR012967
Phobius
CYTOPLASMIC_DOMAIN
40 260 221 – –
Gene3D
G3DSA:3.40.50.150
129 253 125 2.00E-28
IPR029063
SUPERFAMILY
SSF53335
130 254 125 2.99E-21
IPR029063
Pfam
PF00891
141 249 109 5.50E-25
IPR001077

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj1g3v2994540.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2994540.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.