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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3137680 |
| Transcript ID | Lj1g3v3137680.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: auxin-induced protein 5NG4-like [Glycine max] gi|356518529|ref|XP_003527931.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 367 | 367 | 1.00E-235 | ||
| PANTHER | 1 | 367 | 367 | 1.00E-235 | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| Pfam | 6 | 138 | 133 | 1.00E-13 | ||
| Phobius | 26 | 47 | 22 | – | – | |
| TMHMM | 28 | 47 | 20 | – | – | |
| SUPERFAMILY | 31 | 141 | 111 | 4.18E-10 | – | |
| Phobius | 48 | 58 | 11 | – | – | |
| TMHMM | 56 | 73 | 18 | – | – | |
| Phobius | 59 | 77 | 19 | – | – | |
| Phobius | 78 | 88 | 11 | – | – | |
| TMHMM | 88 | 110 | 23 | – | – | |
| Phobius | 89 | 110 | 22 | – | – | |
| Phobius | 111 | 121 | 11 | – | – | |
| TMHMM | 122 | 140 | 19 | – | – | |
| Phobius | 122 | 140 | 19 | – | – | |
| Phobius | 141 | 169 | 29 | – | – | |
| TMHMM | 168 | 190 | 23 | – | – | |
| Pfam | 169 | 307 | 139 | 3.90E-10 | ||
| Phobius | 170 | 187 | 18 | – | – | |
| Phobius | 188 | 198 | 11 | – | – | |
| TMHMM | 197 | 219 | 23 | – | – | |
| Phobius | 199 | 220 | 22 | – | – | |
| Phobius | 221 | 234 | 14 | – | – | |
| SUPERFAMILY | 231 | 311 | 81 | 3.01E-10 | – | |
| TMHMM | 234 | 256 | 23 | – | – | |
| Phobius | 235 | 252 | 18 | – | – | |
| Phobius | 253 | 263 | 11 | – | – | |
| TMHMM | 263 | 285 | 23 | – | – | |
| Phobius | 264 | 284 | 21 | – | – | |
| Phobius | 285 | 289 | 5 | – | – | |
| Phobius | 290 | 309 | 20 | – | – | |
| TMHMM | 290 | 309 | 20 | – | – | |
| Phobius | 310 | 369 | 60 | – | – | |
| MobiDBLite | 315 | 338 | 24 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3137680.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3137680.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.