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Lj1g3v3329210.1

Overview

Field Value
Gene ID Lj1g3v3329210
Transcript ID Lj1g3v3329210.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: clathrin interactor EPSIN 3-like isoform X2 [Cicer arietinum] gi|502090135|ref|XP_004489132.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12276:SF45
1 253 253 1.10E-303 –
PANTHER
PTHR12276
1 253 253 1.10E-303 –
ProSiteProfiles
PS50942
18 150 133 40.865
IPR013809
SUPERFAMILY
SSF48464
23 161 139 4.36E-48
IPR008942
SMART
SM00273
24 150 127 1.20E-57
IPR013809
Gene3D
G3DSA:1.25.40.90
25 162 138 3.70E-55
IPR008942
CDD
cd03571
26 146 121 2.61E-67 –
Pfam
PF01417
26 145 120 7.40E-45
IPR013809
MobiDBLite
mobidb-lite
151 389 239 – –
PANTHER
PTHR12276
324 613 290 1.10E-303 –
PANTHER
PTHR12276:SF45
324 613 290 1.10E-303 –
MobiDBLite
mobidb-lite
428 487 60 – –
MobiDBLite
mobidb-lite
501 726 226 – –
PANTHER
PTHR12276:SF45
705 961 257 1.10E-303 –
PANTHER
PTHR12276
705 961 257 1.10E-303 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 28

Expression data

Expression pattern

Expression pattern of Lj1g3v3329210.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3329210.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.