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Lj1g3v3330540.1

Overview

Field Value
Gene ID Lj1g3v3330540
Transcript ID Lj1g3v3330540.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Glycine max] gi|356516509|ref|XP_003526936.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 188 188 5.60E-138
Phobius 1 48 48
PANTHER 1 188 188 5.60E-138
Phobius 49 70 22
Phobius 71 81 11
Phobius 82 103 22
TMHMM 82 104 23
Phobius 104 108 5
Phobius 109 131 23
TMHMM 109 131 23
Phobius 132 150 19
Phobius 151 171 21
TMHMM 152 171 20
Phobius 172 189 18

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj1g3v3330540.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3330540.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.