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Lj1g3v3384730.1

Overview

Field Value
Gene ID Lj1g3v3384730
Transcript ID Lj1g3v3384730.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: WUSCHEL-related homeobox 8-like [Glycine max] gi|356508610|ref|XP_003523048.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24326
1 35 35 3.70E-53 –
PANTHER
PTHR24326:SF220
1 35 35 3.70E-53 –
PANTHER
PTHR24326
64 198 135 3.70E-53 –
PANTHER
PTHR24326:SF220
64 198 135 3.70E-53 –
Gene3D
G3DSA:1.10.10.60
74 140 67 1.70E-17
IPR009057
ProSiteProfiles
PS50071
74 139 66 15.354
IPR001356
SMART
SM00389
76 143 68 2.70E-16
IPR001356
SUPERFAMILY
SSF46689
77 140 64 1.07E-19
IPR009057
Pfam
PF00046
78 138 61 1.80E-19
IPR001356
CDD
cd00086
78 140 63 4.98E-16 –
MobiDBLite
mobidb-lite
137 165 29 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj1g3v3384730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3384730.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.