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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3385830 |
| Transcript ID | Lj1g3v3385830.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: MLO protein homolog 1-like [Cicer arietinum] gi|502131007|ref|XP_004500844.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 16 | 16 | – | – | |
| PANTHER | 2 | 523 | 522 | 0 | – | |
| PANTHER | 2 | 523 | 522 | 0 | – | |
| Pfam | 8 | 491 | 484 | 1.50E-227 | ||
| TMHMM | 15 | 37 | 23 | – | – | |
| Phobius | 17 | 40 | 24 | – | – | |
| Phobius | 41 | 60 | 20 | – | – | |
| Phobius | 61 | 81 | 21 | – | – | |
| TMHMM | 63 | 85 | 23 | – | – | |
| Phobius | 82 | 151 | 70 | – | – | |
| Phobius | 152 | 174 | 23 | – | – | |
| TMHMM | 152 | 174 | 23 | – | – | |
| Phobius | 175 | 273 | 99 | – | – | |
| Phobius | 274 | 296 | 23 | – | – | |
| TMHMM | 274 | 296 | 23 | – | – | |
| Phobius | 297 | 301 | 5 | – | – | |
| TMHMM | 300 | 317 | 18 | – | – | |
| Phobius | 302 | 324 | 23 | – | – | |
| Phobius | 325 | 357 | 33 | – | – | |
| Phobius | 358 | 381 | 24 | – | – | |
| TMHMM | 358 | 380 | 23 | – | – | |
| Phobius | 382 | 400 | 19 | – | – | |
| TMHMM | 400 | 422 | 23 | – | – | |
| Phobius | 401 | 422 | 22 | – | – | |
| Phobius | 423 | 549 | 127 | – | – | |
| MobiDBLite | 466 | 549 | 84 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj1g3v3385830.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3385830.1, powered by CORGI.
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