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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3556960 |
| Transcript ID | Lj1g3v3556960.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: GPI transamidase component PIG-S-like [Cicer arietinum] gi|502100412|ref|XP_004491711.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 27 | 27 | – | – | |
| Phobius | 1 | 36 | 36 | – | – | |
| PANTHER | 11 | 580 | 570 | 7.00E-185 | ||
| TMHMM | 37 | 55 | 19 | – | – | |
| Phobius | 37 | 55 | 19 | – | – | |
| Pfam | 42 | 565 | 524 | 5.40E-120 | ||
| Phobius | 56 | 537 | 482 | – | – | |
| TMHMM | 532 | 554 | 23 | – | – | |
| Phobius | 538 | 556 | 19 | – | – | |
| Phobius | 557 | 581 | 25 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Attachment of GPI anchor to protein | A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain. | ||
| Cellular component | GPI-anchor transamidase complex | An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxyl-terminus of a precursor protein to a GPI-anchor. |
Expression pattern of Lj1g3v3556960.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3556960.1, powered by CORGI.
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