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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3834090 |
| Transcript ID | Lj1g3v3834090.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ankyrin repeat domain-containing protein 50-like [Glycine max] gi|356560509|ref|XP_003548534.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 246 | 246 | 1.70E-250 | – | |
| PANTHER | 1 | 246 | 246 | 1.70E-250 | – | |
| ProSiteProfiles | 79 | 111 | 33 | 9.644 | ||
| SMART | 79 | 108 | 30 | 0.4 | ||
| Gene3D | 79 | 231 | 153 | 5.50E-21 | ||
| ProSiteProfiles | 79 | 618 | 540 | 61.173 | ||
| SUPERFAMILY | 81 | 417 | 337 | 2.33E-35 | ||
| CDD | 82 | 191 | 110 | 1.29E-12 | – | |
| Pfam | 84 | 163 | 80 | 2.10E-07 | ||
| SMART | 110 | 140 | 31 | 1400 | ||
| SMART | 170 | 199 | 30 | 74 | ||
| SMART | 216 | 245 | 30 | 120 | ||
| Gene3D | 232 | 314 | 83 | 4.90E-09 | ||
| PANTHER | 262 | 636 | 375 | 1.70E-250 | – | |
| PANTHER | 262 | 636 | 375 | 1.70E-250 | – | |
| Pfam | 279 | 329 | 51 | 5.50E-07 | ||
| SUPERFAMILY | 299 | 619 | 321 | 8.44E-52 | ||
| CDD | 302 | 417 | 116 | 2.70E-20 | – | |
| SMART | 303 | 332 | 30 | 0.0024 | ||
| ProSiteProfiles | 303 | 329 | 27 | 10.846 | ||
| Gene3D | 315 | 418 | 104 | 1.20E-25 | ||
| SMART | 340 | 369 | 30 | 5.1 | ||
| Pfam | 343 | 401 | 59 | 3.20E-06 | ||
| SMART | 373 | 402 | 30 | 0.015 | ||
| ProSiteProfiles | 373 | 405 | 33 | 8.603 | ||
| Gene3D | 427 | 624 | 198 | 3.70E-41 | ||
| SMART | 443 | 473 | 31 | 1300 | ||
| CDD | 472 | 620 | 149 | 2.11E-23 | – | |
| SMART | 477 | 506 | 30 | 3.1 | ||
| ProSiteProfiles | 477 | 509 | 33 | 8.923 | ||
| Pfam | 534 | 608 | 75 | 4.80E-12 | ||
| SMART | 544 | 573 | 30 | 0.0039 | ||
| ProSiteProfiles | 544 | 576 | 33 | 11.327 | ||
| ProSiteProfiles | 577 | 609 | 33 | 11.861 | ||
| SMART | 577 | 606 | 30 | 3.90E-04 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v3834090.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3834090.1, powered by CORGI.
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