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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3847260 |
| Transcript ID | Lj1g3v3847260.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable metal-nicotianamine transporter YSL6-like [Cicer arietinum] gi|502169523|ref|XP_004514626.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 674 | 674 | 0 | – | |
| Phobius | 1 | 39 | 39 | – | – | |
| TIGRFAM | 38 | 654 | 617 | 1.60E-111 | ||
| TMHMM | 39 | 58 | 20 | – | – | |
| Pfam | 39 | 658 | 620 | 1.60E-135 | ||
| Phobius | 40 | 60 | 21 | – | – | |
| Phobius | 61 | 65 | 5 | – | – | |
| TMHMM | 65 | 87 | 23 | – | – | |
| Phobius | 66 | 87 | 22 | – | – | |
| Phobius | 88 | 107 | 20 | – | – | |
| TMHMM | 107 | 129 | 23 | – | – | |
| Phobius | 108 | 132 | 25 | – | – | |
| Phobius | 133 | 156 | 24 | – | – | |
| TMHMM | 156 | 178 | 23 | – | – | |
| Phobius | 157 | 178 | 22 | – | – | |
| Phobius | 179 | 266 | 88 | – | – | |
| TMHMM | 234 | 256 | 23 | – | – | |
| Phobius | 267 | 298 | 32 | – | – | |
| TMHMM | 269 | 291 | 23 | – | – | |
| Phobius | 299 | 317 | 19 | – | – | |
| Phobius | 318 | 339 | 22 | – | – | |
| TMHMM | 324 | 346 | 23 | – | – | |
| Phobius | 340 | 388 | 49 | – | – | |
| Phobius | 389 | 412 | 24 | – | – | |
| TMHMM | 392 | 414 | 23 | – | – | |
| Phobius | 413 | 417 | 5 | – | – | |
| Phobius | 418 | 437 | 20 | – | – | |
| TMHMM | 418 | 437 | 20 | – | – | |
| Phobius | 438 | 443 | 6 | – | – | |
| TMHMM | 444 | 463 | 20 | – | – | |
| Phobius | 444 | 462 | 19 | – | – | |
| Phobius | 463 | 467 | 5 | – | – | |
| TMHMM | 467 | 486 | 20 | – | – | |
| Phobius | 468 | 489 | 22 | – | – | |
| Phobius | 490 | 509 | 20 | – | – | |
| TMHMM | 506 | 528 | 23 | – | – | |
| Phobius | 510 | 531 | 22 | – | – | |
| Phobius | 532 | 561 | 30 | – | – | |
| Phobius | 562 | 583 | 22 | – | – | |
| TMHMM | 565 | 582 | 18 | – | – | |
| Phobius | 584 | 603 | 20 | – | – | |
| TMHMM | 602 | 624 | 23 | – | – | |
| Phobius | 604 | 625 | 22 | – | – | |
| Phobius | 626 | 636 | 11 | – | – | |
| Phobius | 637 | 661 | 25 | – | – | |
| TMHMM | 639 | 661 | 23 | – | – | |
| Phobius | 662 | 677 | 16 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3847260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3847260.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.