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Lj1g3v4012960.1

Overview

Field Value
Gene ID Lj1g3v4012960
Transcript ID Lj1g3v4012960.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp]. vesca] gi|470127633|ref|XP_004299772.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR32133
1 367 367 2.10E-67 –
PANTHER
PTHR32133:SF106
1 367 367 2.10E-67 –
Pfam
PF00646
2 54 53 9.40E-06
IPR001810
SUPERFAMILY
SSF81383
16 78 63 6.54E-09
IPR001810
Gene3D
G3DSA:3.80.10.10
16 102 87 4.50E-04
IPR032675

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj1g3v4012960.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4012960.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.