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Lj1g3v4081900.1

Overview

Field Value
Gene ID Lj1g3v4081900
Transcript ID Lj1g3v4081900.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: 70 kDa peptidyl-prolyl isomerase-like [Glycine max] gi|356503354|ref|XP_003520475.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.10.50.40
22 136 115 3.60E-41 –
PANTHER
PTHR10516
24 208 185 1.60E-145
IPR023566
PANTHER
PTHR10516:SF312
24 208 185 1.60E-145 –
SUPERFAMILY
SSF54534
26 136 111 4.71E-34 –
Pfam
PF00254
45 133 89 1.00E-26
IPR001179
ProSiteProfiles
PS50059
48 136 89 28.151
IPR001179
Gene3D
G3DSA:3.10.50.40
140 220 81 3.80E-17 –
SUPERFAMILY
SSF54534
141 220 80 4.12E-13 –
Pfam
PF00254
161 226 66 1.00E-04
IPR001179
SUPERFAMILY
SSF54534
255 388 134 9.23E-24 –
Gene3D
G3DSA:3.10.50.40
257 386 130 9.10E-27 –
Pfam
PF00254
277 366 90 2.10E-14
IPR001179
ProSiteProfiles
PS50059
281 369 89 12.792
IPR001179
PANTHER
PTHR10516:SF312
358 412 55 1.60E-145 –
PANTHER
PTHR10516
358 412 55 1.60E-145
IPR023566
Gene3D
G3DSA:1.10.150.160
387 413 27 2.90E-05
IPR023114

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003755
Molecular function Peptidyl-prolyl cis-trans isomerase activity Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
Subterm of

Genome browser

LORE1 insertions 29

Expression data

Expression pattern

Expression pattern of Lj1g3v4081900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4081900.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.