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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4287660 |
| Transcript ID | Lj1g3v4287660.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: oligopeptide transporter 5-like [Glycine max] gi|356503458|ref|XP_003520525.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 70 | 70 | – | – | |
| MobiDBLite | 1 | 40 | 40 | – | – | |
| PANTHER | 1 | 761 | 761 | 0 | – | |
| PANTHER | 1 | 761 | 761 | 0 | – | |
| TIGRFAM | 47 | 724 | 678 | 3.00E-184 | ||
| TIGRFAM | 53 | 723 | 671 | 5.20E-213 | ||
| TMHMM | 68 | 87 | 20 | – | – | |
| Pfam | 69 | 721 | 653 | 2.40E-167 | ||
| Phobius | 71 | 91 | 21 | – | – | |
| Phobius | 92 | 102 | 11 | – | – | |
| TMHMM | 100 | 122 | 23 | – | – | |
| Phobius | 103 | 126 | 24 | – | – | |
| Phobius | 127 | 145 | 19 | – | – | |
| Phobius | 146 | 173 | 28 | – | – | |
| TMHMM | 147 | 169 | 23 | – | – | |
| Phobius | 174 | 179 | 6 | – | – | |
| Phobius | 180 | 197 | 18 | – | – | |
| TMHMM | 181 | 200 | 20 | – | – | |
| Phobius | 198 | 208 | 11 | – | – | |
| Phobius | 209 | 226 | 18 | – | – | |
| Phobius | 227 | 237 | 11 | – | – | |
| TMHMM | 238 | 260 | 23 | – | – | |
| Phobius | 238 | 260 | 23 | – | – | |
| Phobius | 261 | 265 | 5 | – | – | |
| Phobius | 266 | 286 | 21 | – | – | |
| TMHMM | 267 | 289 | 23 | – | – | |
| Phobius | 287 | 297 | 11 | – | – | |
| Phobius | 298 | 321 | 24 | – | – | |
| TMHMM | 304 | 326 | 23 | – | – | |
| Phobius | 322 | 373 | 52 | – | – | |
| Phobius | 374 | 401 | 28 | – | – | |
| TMHMM | 374 | 396 | 23 | – | – | |
| Phobius | 402 | 438 | 37 | – | – | |
| TMHMM | 438 | 460 | 23 | – | – | |
| Phobius | 439 | 460 | 22 | – | – | |
| Phobius | 461 | 465 | 5 | – | – | |
| Phobius | 466 | 487 | 22 | – | – | |
| TMHMM | 467 | 489 | 23 | – | – | |
| Phobius | 488 | 550 | 63 | – | – | |
| Phobius | 551 | 573 | 23 | – | – | |
| TMHMM | 551 | 573 | 23 | – | – | |
| Phobius | 574 | 622 | 49 | – | – | |
| TMHMM | 619 | 641 | 23 | – | – | |
| Phobius | 623 | 641 | 19 | – | – | |
| Phobius | 642 | 649 | 8 | – | – | |
| Phobius | 650 | 666 | 17 | – | – | |
| Phobius | 667 | 671 | 5 | – | – | |
| TMHMM | 672 | 689 | 18 | – | – | |
| Phobius | 672 | 689 | 18 | – | – | |
| Phobius | 690 | 700 | 11 | – | – | |
| Phobius | 701 | 722 | 22 | – | – | |
| TMHMM | 701 | 723 | 23 | – | – | |
| Phobius | 723 | 763 | 41 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v4287660.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4287660.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.