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Lj1g3v4457750.1

Overview

Field Value
Gene ID Lj1g3v4457750
Transcript ID Lj1g3v4457750.1
Lotus japonicus genome version MG20 v3.0
Description Carbonyl reductase-like protein [Medicago truncatula] gi|357464907|ref|XP_003602735.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.50.720
37 306 270 5.10E-66
IPR016040
SUPERFAMILY
SSF51735
38 305 268 4.89E-55
IPR016040
PRINTS
PR00081
38 55 18 3.00E-21
IPR002347
Pfam
PF00106
38 178 141 1.40E-30
IPR002347
CDD
cd05324
38 313 276 4.80E-92 –
PANTHER
PTHR24322:SF491
41 169 129 3.50E-94 –
PANTHER
PTHR24322
41 169 129 3.50E-94
IPR002347
PRINTS
PR00080
112 123 12 1.40E-11
IPR002347
PRINTS
PR00081
112 123 12 3.00E-21
IPR002347
PRINTS
PR00080
165 173 9 1.40E-11
IPR002347
Coils
Coil
186 206 21 – –
PRINTS
PR00081
232 251 20 3.00E-21
IPR002347
PRINTS
PR00080
232 251 20 1.40E-11
IPR002347
PANTHER
PTHR24322
232 268 37 3.50E-94
IPR002347
PANTHER
PTHR24322:SF491
232 268 37 3.50E-94 –
PRINTS
PR00081
257 274 18 3.00E-21
IPR002347

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj1g3v4457750.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4457750.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.