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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4467770 |
| Transcript ID | Lj1g3v4467770.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-2-like [Glycine max] gi|356511222|ref|XP_003524327.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 38 | 217 | 180 | 5.31E-36 | ||
| Gene3D | 47 | 187 | 141 | 4.00E-31 | ||
| ProSiteProfiles | 48 | 83 | 36 | 8.627 | ||
| SMART | 52 | 80 | 29 | 15 | ||
| CDD | 52 | 113 | 62 | 5.92E-07 | ||
| ProSiteProfiles | 84 | 119 | 36 | 12.17 | ||
| SMART | 88 | 116 | 29 | 0.0045 | ||
| Pfam | 90 | 115 | 26 | 0.0043 | ||
| ProSitePatterns | 97 | 109 | 13 | – | ||
| CDD | 119 | 180 | 62 | 7.89E-11 | ||
| SMART | 119 | 147 | 29 | 9.3 | ||
| Pfam | 119 | 178 | 60 | 6.00E-08 | ||
| ProSiteProfiles | 120 | 150 | 31 | 8.404 | ||
| ProSiteProfiles | 151 | 186 | 36 | 13.174 | ||
| PANTHER | 154 | 178 | 25 | 3.20E-181 | – | |
| PANTHER | 154 | 178 | 25 | 3.20E-181 | – | |
| SMART | 155 | 183 | 29 | 0.94 | ||
| ProSitePatterns | 164 | 176 | 13 | – | ||
| SUPERFAMILY | 217 | 494 | 278 | 4.58E-77 | ||
| ProSiteProfiles | 218 | 301 | 84 | 18.995 | ||
| Gene3D | 219 | 498 | 280 | 6.60E-92 | ||
| Pfam | 221 | 303 | 83 | 2.20E-22 | ||
| PRINTS | 223 | 236 | 14 | 3.30E-29 | ||
| PANTHER | 224 | 500 | 277 | 3.20E-181 | – | |
| PANTHER | 224 | 500 | 277 | 3.20E-181 | – | |
| PRINTS | 236 | 250 | 15 | 3.30E-29 | ||
| PRINTS | 276 | 296 | 21 | 3.30E-29 | ||
| Pfam | 311 | 399 | 89 | 1.20E-21 | ||
| ProSiteProfiles | 312 | 399 | 88 | 20.797 | ||
| PRINTS | 327 | 345 | 19 | 3.30E-29 | ||
| PRINTS | 372 | 390 | 19 | 3.30E-29 | ||
| ProSiteProfiles | 411 | 499 | 89 | 24.251 | ||
| Pfam | 413 | 500 | 88 | 9.30E-25 | ||
| PRINTS | 420 | 442 | 23 | 3.30E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP transmembrane transporter activity | Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v4467770.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4467770.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.