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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4538880 |
| Transcript ID | Lj1g3v4538880.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: CLIP-associated protein-like isoform X2 [Cicer arietinum] gi|502110335|ref|XP_004493856.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 103 | 103 | 9.40E-26 | ||
| PANTHER | 1 | 657 | 657 | 0 | – | |
| PANTHER | 1 | 657 | 657 | 0 | – | |
| SUPERFAMILY | 9 | 91 | 83 | 7.04E-56 | ||
| Gene3D | 13 | 107 | 95 | 4.70E-40 | ||
| Gene3D | 188 | 198 | 11 | 4.70E-40 | ||
| MobiDBLite | 205 | 258 | 54 | – | – | |
| MobiDBLite | 292 | 321 | 30 | – | – | |
| Gene3D | 384 | 617 | 234 | 4.70E-40 | ||
| SMART | 385 | 627 | 243 | 2.50E-21 | – | |
| SUPERFAMILY | 396 | 623 | 228 | 7.04E-56 | ||
| Pfam | 404 | 598 | 195 | 5.20E-11 | ||
| MobiDBLite | 636 | 658 | 23 | – | – | |
| PANTHER | 750 | 1046 | 297 | 0 | – | |
| PANTHER | 750 | 1046 | 297 | 0 | – | |
| SMART | 803 | 1039 | 237 | 3.80E-16 | – | |
| Gene3D | 814 | 1017 | 204 | 4.70E-40 | ||
| SUPERFAMILY | 825 | 1037 | 213 | 7.04E-56 | ||
| Pfam | 833 | 920 | 88 | 4.20E-05 | ||
| Coils | 883 | 903 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v4538880.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4538880.1, powered by CORGI.
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