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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4578730 |
| Transcript ID | Lj1g3v4578730.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | sensitive to aluminum rhizotoxicity 2 protein [Medicago sativa] gi|496629165|gb|AGL45584.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | – | – | |
| PANTHER | 12 | 286 | 275 | 3.60E-113 | ||
| PANTHER | 12 | 286 | 275 | 3.60E-113 | – | |
| TMHMM | 37 | 56 | 20 | – | – | |
| Phobius | 37 | 56 | 20 | – | – | |
| Pfam | 41 | 274 | 234 | 2.10E-70 | ||
| TIGRFAM | 45 | 280 | 236 | 1.60E-61 | ||
| Phobius | 57 | 67 | 11 | – | – | |
| Phobius | 68 | 87 | 20 | – | – | |
| TMHMM | 68 | 87 | 20 | – | – | |
| Phobius | 88 | 92 | 5 | – | – | |
| TMHMM | 92 | 111 | 20 | – | – | |
| Phobius | 93 | 110 | 18 | – | – | |
| Phobius | 111 | 121 | 11 | – | – | |
| Phobius | 122 | 145 | 24 | – | – | |
| TMHMM | 123 | 145 | 23 | – | – | |
| Phobius | 146 | 150 | 5 | – | – | |
| TMHMM | 150 | 169 | 20 | – | – | |
| Phobius | 151 | 171 | 21 | – | – | |
| Phobius | 172 | 219 | 48 | – | – | |
| Phobius | 220 | 238 | 19 | – | – | |
| TMHMM | 221 | 238 | 18 | – | – | |
| Phobius | 239 | 243 | 5 | – | – | |
| Phobius | 244 | 270 | 27 | – | – | |
| TMHMM | 248 | 270 | 23 | – | – | |
| Phobius | 271 | 287 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v4578730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4578730.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.