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Lj1g3v4680330.1

Overview

Field Value
Gene ID Lj1g3v4680330
Transcript ID Lj1g3v4680330.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PWWP domain-containing protein [Arabidopsis thaliana] gi|15229988|ref|NP_187194.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 72 72
Gene3D 151 236 86 1.70E-15
SUPERFAMILY 151 247 97 2.77E-18
Pfam 152 233 82 4.70E-14
ProSiteProfiles 153 211 59 11.823
MobiDBLite 237 300 64

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj1g3v4680330.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4680330.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.