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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4838380 |
| Transcript ID | Lj1g3v4838380.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: flowering time control protein FCA-like [Glycine max] gi|356503942|ref|XP_003520758.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 277 | 276 | 6.40E-51 | ||
| PANTHER | 2 | 277 | 276 | 6.40E-51 | – | |
| Gene3D | 3 | 154 | 152 | 6.40E-25 | ||
| SUPERFAMILY | 3 | 49 | 47 | 1.90E-06 | ||
| ProSiteProfiles | 69 | 144 | 76 | 15.63 | ||
| SUPERFAMILY | 70 | 156 | 87 | 3.49E-20 | ||
| SMART | 70 | 140 | 71 | 8.30E-16 | ||
| Pfam | 71 | 132 | 62 | 3.40E-15 | ||
| MobiDBLite | 273 | 303 | 31 | – | – | |
| SMART | 301 | 333 | 33 | 8.80E-05 | ||
| Pfam | 304 | 331 | 28 | 9.70E-09 | ||
| CDD | 304 | 333 | 30 | 3.12E-06 | – | |
| Gene3D | 304 | 334 | 31 | 1.40E-12 | – | |
| SUPERFAMILY | 305 | 337 | 33 | 3.71E-10 | ||
| ProSiteProfiles | 306 | 333 | 28 | 11.211 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v4838380.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4838380.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.