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SM00456

Source: SMART

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Associated Lotus transcripts 34

Transcript Name Description Predicted domains Domain count
Lj0g3v0170919.2
– WW domain-containing protein [Arabidopsis thaliana] gi|42571161|ref|NP_973654.1|
Domains
10
Lj0g3v0348739.1
– WW domain-containing protein [Arabidopsis thaliana] gi|79400098|ref|NP_187930.2|
Domains
10
Lj0g3v0348739.2
– WW domain-containing protein [Arabidopsis thaliana] gi|79400098|ref|NP_187930.2|
Domains
10
Lj1g3v4838380.1
– PREDICTED: flowering time control protein FCA-like [Glycine max] gi|356503942|ref|XP_003520758.1|
Domains
18
Lj1g3v4838380.2
– PREDICTED: flowering time control protein FCA-like [Glycine max] gi|356503942|ref|XP_003520758.1|
Domains
8
Lj2g3v1451720.1
– PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Glycine max] gi|356511678|ref|XP_003524550.1|
Domains
29
Lj3g3v3511390.1
– PREDICTED: pre-mRNA-processing protein 40C-like [Cicer arietinum] gi|502144739|ref|XP_004505734.1|
Domains
18
Lj3g3v3511390.2
– PREDICTED: pre-mRNA-processing protein 40C-like [Cicer arietinum] gi|502144739|ref|XP_004505734.1|
Domains
18
Lj4g3v0510130.1
– PREDICTED: probable phosphoinositide phosphatase SAC9-like [Cicer arietinum] gi|502142904|ref|XP_004505147.1|
Domains
14
Lj4g3v0510130.2
– PREDICTED: probable phosphoinositide phosphatase SAC9-like [Cicer arietinum] gi|502142904|ref|XP_004505147.1|
Domains
15
Lj4g3v0510130.3
– PREDICTED: probable phosphoinositide phosphatase SAC9-like [Cicer arietinum] gi|502142904|ref|XP_004505147.1|
Domains
14
Lj4g3v2263920.1
– PREDICTED: flowering time control protein FCA-like [Cicer arietinum] gi|502150804|ref|XP_004508132.1|
Domains
20
Lj4g3v2263920.2
– PREDICTED: flowering time control protein FCA-like [Cicer arietinum] gi|502150804|ref|XP_004508132.1|
Domains
20
Lj5g3v0322430.1
– PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine max] gi|356554026|ref|XP_003545351.1|
Domains
18
Lj5g3v2067220.1
– PREDICTED: pre-mRNA-processing factor 40 homolog A-like [Glycine max] gi|356574333|ref|XP_003555303.1|
Domains
18
Lj5g3v2067220.2
– PREDICTED: pre-mRNA-processing factor 40 homolog A-like [Glycine max] gi|356574333|ref|XP_003555303.1|
Domains
18
Lj6g3v1586670.1
– PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Cicer arietinum] gi|502080278|ref|XP_004486514.1|
Domains
31
LotjaGi1g1v0758000_LC.2
– Flowering time control protein FCA; TAIR: AT2G47310.1 flowering time control protein-related / FCA gamma-like protein; Swiss-Prot: sp|O04425|FCA_ARATH Flowering time control protein FCA; TrEMBL-Plants: tr|I1JQT8|I1JQT8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0758000_LC
Domains
11
LotjaGi1g1v0758000_LC.4
– RNA binding protein, putative; TAIR: AT2G47310.1 flowering time control protein-related / FCA gamma-like protein; Swiss-Prot: sp|O04425|FCA_ARATH Flowering time control protein FCA; TrEMBL-Plants: tr|I1JQT8|I1JQT8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0758000_LC
Domains
19
LotjaGi1g1v0758600_LC.1
– RNA binding protein, putative; TAIR: AT2G47310.1 flowering time control protein-related / FCA gamma-like protein; Swiss-Prot: sp|O04425|FCA_ARATH Flowering time control protein FCA; TrEMBL-Plants: tr|I1JQT8|I1JQT8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0758600_LC
Domains
19
LotjaGi2g1v0244000.1
– ATP-dependent RNA helicase DB10; TAIR: AT5G14610.2 DEAD box RNA helicase family protein; Swiss-Prot: sp|Q9LYJ9|RH46_ARATH DEAD-box ATP-dependent RNA helicase 46; TrEMBL-Plants: tr|K7KNL8|K7KNL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0244000
Domains
29
LotjaGi3g1v0526200.1
– Pre-mRNA-processing protein 40C; TAIR: AT3G19840.1 pre-mRNA-processing protein 40C; Swiss-Prot: sp|Q9LT25|PR40C_ARATH Pre-mRNA-processing protein 40C; TrEMBL-Plants: tr|K7LP03|K7LP03_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0526200
Domains
20
LotjaGi4g1v0067700.1
– SacI-like domain protein/WW domain protein; TAIR: AT3G59770.1 sacI homology domain-containing protein / WW domain-containing protein; Swiss-Prot: sp|Q7XZU0|SAC9_ARATH Probable phosphoinositide phosphatase SAC9; TrEMBL-Plants: tr|K7K890|K7K890_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0067700
Domains
19
LotjaGi4g1v0332700.1
– RNA binding protein, putative; TAIR: AT4G16280.2 flowering time control protein FCA; Swiss-Prot: sp|O04425|FCA_ARATH Flowering time control protein FCA; TrEMBL-Plants: tr|I1MRT0|I1MRT0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0332700
Domains
22
LotjaGi5g1v0035800.1
– Pre-mRNA-processing 40A-like protein; TAIR: AT1G44910.1 pre-mRNA-processing protein 40A; Swiss-Prot: sp|B6EUA9|PR40A_ARATH Pre-mRNA-processing protein 40A; TrEMBL-Plants: tr|A0A0B2Q6I5|A0A0B2Q6I5_GLYSO Pre-mRNA-processing factor 40 like A; Found in the gene: LotjaGi5g1v0035800
Domains
21
LotjaGi5g1v0035800.2
– Pre-mRNA-processing 40A-like protein; TAIR: AT1G44910.1 pre-mRNA-processing protein 40A; Swiss-Prot: sp|B6EUA9|PR40A_ARATH Pre-mRNA-processing protein 40A; TrEMBL-Plants: tr|A0A0B2Q6I5|A0A0B2Q6I5_GLYSO Pre-mRNA-processing factor 40 like A; Found in the gene: LotjaGi5g1v0035800
Domains
21
LotjaGi5g1v0132500.1
– Polyglutamine-binding protein 1; TAIR: AT2G41020.1 WW domain-containing protein; Swiss-Prot: sp|A2T806|PQBP1_PONPY Polyglutamine-binding protein 1; TrEMBL-Plants: tr|K7K8S1|K7K8S1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0132500
Domains
14
LotjaGi5g1v0320000.1
– Pre-mRNA-processing 40A-like protein; TAIR: AT1G44910.1 pre-mRNA-processing protein 40A; Swiss-Prot: sp|B6EUA9|PR40A_ARATH Pre-mRNA-processing protein 40A; TrEMBL-Plants: tr|A0A151U7I4|A0A151U7I4_CAJCA Pre-mRNA-processing factor 40 isogeny A; Found in the gene: LotjaGi5g1v0320000
Domains
21
LotjaGi5g1v0320000.2
– Pre-mRNA-processing 40A-like protein; TAIR: AT1G44910.1 pre-mRNA-processing protein 40A; Swiss-Prot: sp|B6EUA9|PR40A_ARATH Pre-mRNA-processing protein 40A; TrEMBL-Plants: tr|A0A151U7I4|A0A151U7I4_CAJCA Pre-mRNA-processing factor 40 isogeny A; Found in the gene: LotjaGi5g1v0320000
Domains
21
LotjaGi6g1v0139900.1
– WW domain protein, putative; TAIR: AT3G13225.2 WW domain-containing protein; Swiss-Prot: sp|Q8N3X1|FNBP4_HUMAN Formin-binding protein 4; TrEMBL-Plants: tr|K7LAD5|K7LAD5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0139900
Domains
12
LotjaGi6g1v0139900.2
– WW domain protein, putative; TAIR: AT3G13225.2 WW domain-containing protein; Swiss-Prot: sp|Q8N3X1|FNBP4_HUMAN Formin-binding protein 4; TrEMBL-Plants: tr|K7LAD5|K7LAD5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0139900
Domains
12
LotjaGi6g1v0139900.3
– WW domain protein, putative; TAIR: AT3G13225.2 WW domain-containing protein; Swiss-Prot: sp|Q8N3X1|FNBP4_HUMAN Formin-binding protein 4; TrEMBL-Plants: tr|K7LAD5|K7LAD5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0139900
Domains
12
LotjaGi6g1v0139900.4
– WW domain protein, putative; TAIR: AT3G13225.2 WW domain-containing protein; Swiss-Prot: sp|Q8N3X1|FNBP4_HUMAN Formin-binding protein 4; TrEMBL-Plants: tr|K7LAD5|K7LAD5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0139900
Domains
12
LotjaGi6g1v0263600.1
– ATP-dependent RNA helicase DeaD; TAIR: AT3G06480.1 DEAD box RNA helicase family protein; Swiss-Prot: sp|Q9SQV1|RH40_ARATH DEAD-box ATP-dependent RNA helicase 40; TrEMBL-Plants: tr|A0A151T665|A0A151T665_CAJCA DEAD-box ATP-dependent RNA helicase 40; Found in the gene: LotjaGi6g1v0263600
Domains
30

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 2.94