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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4913250 |
| Transcript ID | Lj1g3v4913250.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: auxin-induced protein 5NG4-like [Glycine max] gi|356557531|ref|XP_003547069.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 170 | 170 | 5.30E-90 | ||
| Phobius | 1 | 29 | 29 | – | – | |
| PANTHER | 1 | 170 | 170 | 5.30E-90 | – | |
| TMHMM | 25 | 47 | 23 | – | – | |
| Phobius | 30 | 47 | 18 | – | – | |
| SUPERFAMILY | 31 | 117 | 87 | 6.54E-05 | – | |
| Phobius | 48 | 58 | 11 | – | – | |
| Phobius | 59 | 86 | 28 | – | – | |
| TMHMM | 60 | 82 | 23 | – | – | |
| Phobius | 87 | 97 | 11 | – | – | |
| Phobius | 98 | 118 | 21 | – | – | |
| Phobius | 119 | 149 | 31 | – | – | |
| Phobius | 150 | 176 | 27 | – | – | |
| Phobius | 177 | 178 | 2 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj1g3v4913250.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4913250.1, powered by CORGI.
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