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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4918600 |
| Transcript ID | Lj1g3v4918600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max] gi|356505803|ref|XP_003521679.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 10 | 286 | 277 | 9.50E-36 | ||
| PANTHER | 10 | 247 | 238 | 1.00E-156 | – | |
| PANTHER | 10 | 247 | 238 | 1.00E-156 | – | |
| SUPERFAMILY | 37 | 206 | 170 | 1.73E-23 | – | |
| Pfam | 61 | 78 | 18 | 0.22 | ||
| SMART | 62 | 87 | 26 | 11 | ||
| SMART | 93 | 118 | 26 | 440 | ||
| SMART | 144 | 169 | 26 | 1.1 | ||
| SMART | 170 | 195 | 26 | 1 | ||
| SUPERFAMILY | 170 | 391 | 222 | 1.37E-32 | – | |
| Pfam | 170 | 193 | 24 | 0.51 | ||
| SMART | 196 | 220 | 25 | 3.1 | ||
| SMART | 221 | 245 | 25 | 39 | ||
| SMART | 246 | 271 | 26 | 11 | ||
| Gene3D | 293 | 434 | 142 | 7.50E-30 | ||
| SMART | 323 | 348 | 26 | 7.80E-05 | ||
| PANTHER | 325 | 556 | 232 | 1.00E-156 | – | |
| PANTHER | 325 | 556 | 232 | 1.00E-156 | – | |
| SUPERFAMILY | 346 | 553 | 208 | 2.88E-37 | – | |
| SMART | 349 | 374 | 26 | 0.0044 | ||
| SMART | 375 | 400 | 26 | 0.2 | ||
| SMART | 401 | 426 | 26 | 0.44 | ||
| SMART | 427 | 451 | 25 | 15 | ||
| Gene3D | 435 | 551 | 117 | 4.60E-08 | ||
| SMART | 452 | 477 | 26 | 0.0016 | ||
| SMART | 478 | 503 | 26 | 5.20E-04 | ||
| Pfam | 478 | 501 | 24 | 0.055 | ||
| SMART | 504 | 528 | 25 | 320 | ||
| SMART | 529 | 554 | 26 | 0.011 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v4918600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4918600.1, powered by CORGI.
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