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Lj1g3v4954920.1

Overview

Field Value
Gene ID Lj1g3v4954920
Transcript ID Lj1g3v4954920.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor bHLH96-like [Glycine max] gi|356573022|ref|XP_003554664.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11969
41 375 335 1.90E-166 –
PANTHER
PTHR11969:SF26
41 375 335 1.90E-166 –
MobiDBLite
mobidb-lite
125 170 46 – –
CDD
cd00083
169 226 58 7.12E-12 –
Gene3D
G3DSA:4.10.280.10
169 226 58 6.40E-13
IPR011598
SUPERFAMILY
SSF47459
170 233 64 3.14E-15
IPR011598
ProSiteProfiles
PS50888
170 221 52 14.716
IPR011598
Pfam
PF00010
171 222 52 8.10E-10
IPR011598
SMART
SM00353
176 227 52 1.10E-08
IPR011598

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj1g3v4954920.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4954920.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.