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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4999550 |
| Transcript ID | Lj1g3v4999550.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Chloroplast J-like domain 1 [Theobroma cacao] gi|508719035|gb|EOY10932.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 151 | 151 | – | – | |
| PANTHER | 1 | 193 | 193 | 3.70E-146 | – | |
| PANTHER | 1 | 193 | 193 | 3.70E-146 | – | |
| Pfam | 81 | 191 | 111 | 1.00E-13 | ||
| Coils | 82 | 102 | 21 | – | – | |
| Phobius | 152 | 168 | 17 | – | – | |
| Phobius | 169 | 173 | 5 | – | – | |
| Phobius | 174 | 189 | 16 | – | – | |
| Phobius | 190 | 223 | 34 | – | – | |
| PANTHER | 219 | 280 | 62 | 3.70E-146 | – | |
| PANTHER | 219 | 280 | 62 | 3.70E-146 | – | |
| Phobius | 224 | 242 | 19 | – | – | |
| TMHMM | 225 | 247 | 23 | – | – | |
| Phobius | 243 | 261 | 19 | – | – | |
| Phobius | 262 | 279 | 18 | – | – | |
| TMHMM | 262 | 279 | 18 | – | – | |
| Phobius | 280 | 280 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v4999550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4999550.1, powered by CORGI.
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