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Lj1g3v5020860.1

Overview

Field	Value
Gene ID	Lj1g3v5020860
Transcript ID	Lj1g3v5020860.1
Lotus japonicus genome version	MG20 v3.0
Description	PREDICTED: GDSL esterase/lipase LTL1-like [Cicer arietinum] gi\|502113785\|ref\|XP_004494758.1\|
Working Lj name	n.a.

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Prediction algorithm	Identifier	Start	End	Length	E-value	InterPro ID
SignalP	SignalP-noTM_EUK View details on SignalP-noTM_EUK Search for proteins/transripts with this domain	1	31	31	–	–
ProSiteProfiles	PS51257 View details on PS51257 Search for proteins/transripts with this domain View external data on PS51257	1	16	16	5	–
SignalP	SignalP-TM_GRAM_POSITIVE View details on SignalP-TM_GRAM_POSITIVE Search for proteins/transripts with this domain	1	28	28	–	–
TMHMM	TMhelix View details on TMhelix Search for proteins/transripts with this domain	7	26	20	–	–
PANTHER	PTHR22835:SF160 View details on PTHR22835:SF160 Search for proteins/transripts with this domain View external data on PTHR22835:SF160	17	334	318	6.10E-236	–
PANTHER	PTHR22835 View details on PTHR22835 Search for proteins/transripts with this domain View external data on PTHR22835	17	334	318	6.10E-236	–
Gene3D	G3DSA:3.40.50.1110 View details on G3DSA:3.40.50.1110 Search for proteins/transripts with this domain View external data on G3DSA:3.40.50.1110	22	334	313	2.30E-85	IPR013830 Show description in modal box View details on IPR013830 Search for proteins/transripts with this domain View on EBI InterPro Service
CDD	cd01837 View details on cd01837 Search for proteins/transripts with this domain View external data on cd01837	33	334	302	5.15E-122	–
Pfam	PF00657 View details on PF00657 Search for proteins/transripts with this domain View external data on PF00657	35	264	230	4.10E-11	IPR001087 Show description in modal box View details on IPR001087 Search for proteins/transripts with this domain View on EBI InterPro Service

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0016788 View details of GO:0016788 AmiGO InterPro QuickGO	Molecular function	Hydrolase activity, acting on ester bonds	Catalysis of the hydrolysis of any ester bond.	Subterm of View details of GO:0016787

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj1g3v5020860.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v5020860.1, powered by CORGI.

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