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Lj2g3v0136420.1

Overview

Field Value
Gene ID Lj2g3v0136420
Transcript ID Lj2g3v0136420.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 35 35
SignalP 1 34 34
Phobius 1 19 19
TMHMM 13 35 23
Phobius 20 31 12
Phobius 32 35 4
Phobius 36 537 502
MobiDBLite 39 294 256
PRINTS 41 53 13 4.80E-14
PRINTS 67 88 22 4.80E-14
PRINTS 88 104 17 4.80E-14
PRINTS 107 124 18 4.80E-14
MobiDBLite 420 442 23

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj2g3v0136420.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0136420.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.