Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | Lj2g3v0523290 |
| Transcript ID | Lj2g3v0523290.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peroxidase 47-like [Glycine max] gi|356530973|ref|XP_003534053.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 313 | 313 | 9.50E-225 | – | |
| Phobius | 1 | 21 | 21 | – | – | |
| SignalP | 1 | 17 | 17 | – | – | |
| PANTHER | 1 | 313 | 313 | 9.50E-225 | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| Phobius | 16 | 21 | 6 | – | – | |
| Phobius | 22 | 313 | 292 | – | – | |
| ProSiteProfiles | 24 | 313 | 290 | 73.745 | ||
| SUPERFAMILY | 24 | 313 | 290 | 3.83E-101 | ||
| CDD | 25 | 312 | 288 | 2.27E-167 | ||
| PRINTS | 34 | 53 | 20 | 6.40E-52 | ||
| Gene3D | 34 | 174 | 141 | 2.30E-35 | – | |
| Pfam | 41 | 276 | 236 | 2.40E-76 | ||
| ProSitePatterns | 56 | 67 | 12 | – | ||
| PRINTS | 56 | 70 | 15 | 2.70E-29 | ||
| PRINTS | 58 | 78 | 21 | 6.40E-52 | ||
| PRINTS | 97 | 110 | 14 | 6.40E-52 | ||
| PRINTS | 116 | 126 | 11 | 6.40E-52 | ||
| PRINTS | 117 | 134 | 18 | 2.70E-29 | ||
| PRINTS | 135 | 150 | 16 | 6.40E-52 | ||
| PRINTS | 135 | 147 | 13 | 2.70E-29 | ||
| Gene3D | 175 | 292 | 118 | 2.70E-45 | – | |
| PRINTS | 181 | 193 | 13 | 6.40E-52 | ||
| ProSitePatterns | 182 | 192 | 11 | – | ||
| PRINTS | 182 | 197 | 16 | 2.70E-29 | ||
| PRINTS | 231 | 246 | 16 | 6.40E-52 | ||
| PRINTS | 233 | 248 | 16 | 2.70E-29 | ||
| PRINTS | 247 | 264 | 18 | 6.40E-52 | ||
| PRINTS | 287 | 300 | 14 | 6.40E-52 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Hydrogen peroxide catabolic process | The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2). | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj2g3v0523290.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…
A list of the top 25 highly co-expressed genes of Lj2g3v0523290.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.