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Lj2g3v0571750.1

Overview

Field Value
Gene ID Lj2g3v0571750
Transcript ID Lj2g3v0571750.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS50181
2 50 49 10.478
IPR001810
PANTHER
PTHR32212
3 159 157 1.20E-40 –
PANTHER
PTHR32212:SF126
3 159 157 1.20E-40 –
SUPERFAMILY
SSF81383
3 90 88 4.45E-14
IPR001810
Gene3D
G3DSA:3.80.10.10
3 45 43 6.80E-09
IPR032675
Pfam
PF00646
4 41 38 7.50E-09
IPR001810
SMART
SM00256
8 47 40 0.0048
IPR001810
Gene3D
G3DSA:3.80.10.10
111 149 39 6.80E-09
IPR032675

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj2g3v0571750.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0571750.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.