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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0609610 |
| Transcript ID | Lj2g3v0609610.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable metal-nicotianamine transporter YSL7-like [Glycine max] gi|356560021|ref|XP_003548294.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 43 | 43 | – | – | |
| Phobius | 1 | 61 | 61 | – | – | |
| PANTHER | 17 | 268 | 252 | 1.10E-181 | – | |
| PANTHER | 17 | 268 | 252 | 1.10E-181 | – | |
| Pfam | 61 | 265 | 205 | 7.60E-51 | ||
| Phobius | 62 | 84 | 23 | – | – | |
| TMHMM | 62 | 84 | 23 | – | – | |
| Phobius | 85 | 89 | 5 | – | – | |
| TMHMM | 88 | 110 | 23 | – | – | |
| Phobius | 90 | 109 | 20 | – | – | |
| Phobius | 110 | 129 | 20 | – | – | |
| Phobius | 130 | 153 | 24 | – | – | |
| TMHMM | 131 | 153 | 23 | – | – | |
| Phobius | 154 | 172 | 19 | – | – | |
| Phobius | 173 | 194 | 22 | – | – | |
| TMHMM | 173 | 195 | 23 | – | – | |
| Phobius | 195 | 233 | 39 | – | – | |
| Phobius | 234 | 252 | 19 | – | – | |
| TMHMM | 234 | 253 | 20 | – | – | |
| Phobius | 253 | 268 | 16 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v0609610.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0609610.2, powered by CORGI.
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