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Lj2g3v0635430.1

Overview

Field Value
Gene ID Lj2g3v0635430
Transcript ID Lj2g3v0635430.1
Lotus japonicus genome version MG20 v3.0
Description chalcone reductase [Sesbania rostrata] gi|2792155|emb|CAA11226.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF000097
2 316 315 1.20E-87
IPR020471
PANTHER
PTHR11732:SF239
5 121 117 3.10E-225 –
PANTHER
PTHR11732
5 121 117 3.10E-225
IPR001395
Gene3D
G3DSA:3.20.20.100
8 304 297 1.20E-97
IPR023210
SUPERFAMILY
SSF51430
8 304 297 6.42E-85
IPR023210
CDD
cd06660
12 293 282 1.92E-84
IPR023210
Pfam
PF00248
21 292 272 2.90E-46
IPR023210
PRINTS
PR00069
42 66 25 2.60E-50
IPR020471
ProSitePatterns
PS00798
46 63 18 –
IPR018170
PRINTS
PR00069
103 121 19 2.60E-50
IPR020471
PANTHER
PTHR11732:SF239
139 319 181 3.10E-225 –
PANTHER
PTHR11732
139 319 181 3.10E-225
IPR001395
ProSitePatterns
PS00062
151 168 18 –
IPR018170
PRINTS
PR00069
151 168 18 2.60E-50
IPR020471
PRINTS
PR00069
185 214 30 2.60E-50
IPR020471
PRINTS
PR00069
229 253 25 2.60E-50
IPR020471
ProSitePatterns
PS00063
262 277 16 –
IPR018170

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj2g3v0635430.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0635430.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.