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Lj2g3v0661590.1

Overview

Field Value
Gene ID Lj2g3v0661590
Transcript ID Lj2g3v0661590.1
Lotus japonicus genome version MG20 v3.0
Description NARROW ORGAN 1 [Lotus japonicus] gi|402575786|gb|AFQ69083.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24326
52 219 168 6.70E-51 –
PANTHER
PTHR24326:SF186
52 219 168 6.70E-51 –
SMART
SM00389
53 120 68 9.50E-05
IPR001356
Pfam
PF00046
56 115 60 6.40E-20
IPR001356
Gene3D
G3DSA:1.10.10.60
56 115 60 3.40E-09
IPR009057
SUPERFAMILY
SSF46689
56 121 66 1.41E-12
IPR009057
CDD
cd00086
57 117 61 3.39E-06 –
ProSiteProfiles
PS50071
61 116 56 11.451
IPR001356
MobiDBLite
mobidb-lite
114 141 28 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions 17

Expression data

Expression pattern

Expression pattern of Lj2g3v0661590.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0661590.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.